BLASTX nr result

ID: Coptis21_contig00020288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020288
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173434.1| hypothetical protein NitaMp095 [Nicotiana tabac...    80   2e-13
ref|XP_002874489.1| hypothetical protein ARALYDRAFT_489701 [Arab...    76   3e-12
ref|NP_085526.1| hypothetical protein ArthMp059 [Arabidopsis tha...    66   3e-09
ref|YP_005090393.1| orf192 (mitochondrion) [Phoenix dactylifera]...    63   2e-08

>ref|YP_173434.1| hypothetical protein NitaMp095 [Nicotiana tabacum]
           gi|56806598|dbj|BAD83499.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 147

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 241 TYTNFLSSTVVDLFSATEKKRSRFDSAQPNDTSNTNDLCLECVARSLL 98
           +Y++FL +   DLFSATEKKRSRF SAQPNDTSNTNDLCLECVARSLL
Sbjct: 100 SYSSFLKARGRDLFSATEKKRSRFYSAQPNDTSNTNDLCLECVARSLL 147


>ref|XP_002874489.1| hypothetical protein ARALYDRAFT_489701 [Arabidopsis lyrata subsp.
           lyrata] gi|297320326|gb|EFH50748.1| hypothetical protein
           ARALYDRAFT_489701 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -3

Query: 208 DLFSATEKKRSRFDSAQPNDTSNTNDLCLECVARSL 101
           DLFSATEKKRSRFDSAQPNDTSNTNDLCLECVARSL
Sbjct: 101 DLFSATEKKRSRFDSAQPNDTSNTNDLCLECVARSL 136


>ref|NP_085526.1| hypothetical protein ArthMp059 [Arabidopsis thaliana]
           gi|44888131|sp|P93318.1|M660_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00660;
           AltName: Full=ORF149 gi|1785727|emb|CAA69750.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 149

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -3

Query: 205 LFSATEKKRSRFDSAQPNDTSNTNDLCLECVARSL 101
           LF   +KKRSRFDSAQPNDTSNTNDLCLECVARSL
Sbjct: 114 LFCNEKKKRSRFDSAQPNDTSNTNDLCLECVARSL 148


>ref|YP_005090393.1| orf192 (mitochondrion) [Phoenix dactylifera]
           gi|343478445|gb|AEM43933.1| orf192 (mitochondrion)
           [Phoenix dactylifera]
          Length = 191

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/41 (75%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
 Frame = -3

Query: 241 TYTNFLSSTVVDLFSATEK-KRSRFDSAQPNDTSNTNDLCL 122
           +Y++FL + V DLFSAT+K +RSRFDSAQPNDTSNTNDLCL
Sbjct: 135 SYSSFLKAGVRDLFSATDKNQRSRFDSAQPNDTSNTNDLCL 175


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