BLASTX nr result

ID: Coptis21_contig00020281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020281
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603149.1| Cytochrome c oxidase subunit [Medicago trunc...   130   1e-28
emb|CAN72575.1| hypothetical protein VITISV_004232 [Vitis vinifera]   128   5e-28
emb|CBI20663.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002516442.1| zinc/iron transporter, putative [Ricinus com...   127   1e-27
ref|XP_002279424.1| PREDICTED: zinc transporter 4, chloroplastic...   126   2e-27

>ref|XP_003603149.1| Cytochrome c oxidase subunit [Medicago truncatula]
           gi|355492197|gb|AES73400.1| Cytochrome c oxidase subunit
           [Medicago truncatula]
          Length = 403

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/97 (63%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   PLVGKNRKLLKTDGNFFFAMKAFAAGVILATGYVHMLSDGSAALTAPCLGGSLWLKFPFS 180
           PL+GK+R+ L+TDGN F A KAFAAGVILATG+VHMLSD + AL +PCL    W KFPF+
Sbjct: 42  PLIGKHRRYLRTDGNLFVAAKAFAAGVILATGFVHMLSDATEALNSPCLPEFPWSKFPFT 101

Query: 181 GFIAMMASLGTLMVEFVGTQFFERRQRKRRVVDEIRR 291
           GF AMMA+L TL+++FVGTQ++ER+Q   R VDE  R
Sbjct: 102 GFFAMMAALFTLLLDFVGTQYYERKQGMNRAVDEQAR 138


>emb|CAN72575.1| hypothetical protein VITISV_004232 [Vitis vinifera]
          Length = 379

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/91 (65%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   PLVGKNRKLLKTDGNFFFAMKAFAAGVILATGYVHMLSDGSAALTAPCLGGSLWLKFPFS 180
           PLVGK R+ L+TDGN FFA KAFAAGVILATG+VHML DGS AL+  CL  + W KFPFS
Sbjct: 42  PLVGKKRRFLRTDGNLFFAAKAFAAGVILATGFVHMLPDGSTALSDSCLPKNPWSKFPFS 101

Query: 181 GFIAMMASLGTLMVEFVGTQFFERRQRKRRV 273
           GF AM+++L TL+V+FVGTQ++ER+Q + +V
Sbjct: 102 GFFAMVSALATLVVDFVGTQYYERKQERTQV 132


>emb|CBI20663.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/94 (62%), Positives = 75/94 (79%)
 Frame = +1

Query: 1   PLVGKNRKLLKTDGNFFFAMKAFAAGVILATGYVHMLSDGSAALTAPCLGGSLWLKFPFS 180
           PLVGK R+ L+TDGN FFA KAFAAGVILATG+VHML DGS AL+  CL  + W KFPFS
Sbjct: 76  PLVGKKRRFLRTDGNLFFAAKAFAAGVILATGFVHMLPDGSTALSDSCLPKNPWSKFPFS 135

Query: 181 GFIAMMASLGTLMVEFVGTQFFERRQRKRRVVDE 282
           GF AM+++L TL+V+FVGTQ++ER+Q + +   +
Sbjct: 136 GFFAMVSALATLVVDFVGTQYYERKQERTQATKD 169


>ref|XP_002516442.1| zinc/iron transporter, putative [Ricinus communis]
           gi|223544262|gb|EEF45783.1| zinc/iron transporter,
           putative [Ricinus communis]
          Length = 419

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/94 (65%), Positives = 75/94 (79%)
 Frame = +1

Query: 1   PLVGKNRKLLKTDGNFFFAMKAFAAGVILATGYVHMLSDGSAALTAPCLGGSLWLKFPFS 180
           PL+GK+R+ L+TDG+ F A KAFAAGVILATG+VHMLS GS AL+ PCL    W KFPFS
Sbjct: 71  PLIGKHRRFLRTDGSLFVAAKAFAAGVILATGFVHMLSGGSEALSNPCLPEYPWSKFPFS 130

Query: 181 GFIAMMASLGTLMVEFVGTQFFERRQRKRRVVDE 282
           GF AMMASL TL+V+FVGTQ++ER+Q   R  +E
Sbjct: 131 GFFAMMASLLTLLVDFVGTQYYERKQGLNRASEE 164


>ref|XP_002279424.1| PREDICTED: zinc transporter 4, chloroplastic-like [Vitis vinifera]
          Length = 413

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/88 (67%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   PLVGKNRKLLKTDGNFFFAMKAFAAGVILATGYVHMLSDGSAALTAPCLGGSLWLKFPFS 180
           PLVGK R+ L+TDGN FFA KAFAAGVILATG+VHML DGS AL+  CL  + W KFPFS
Sbjct: 76  PLVGKKRRFLRTDGNLFFAAKAFAAGVILATGFVHMLPDGSTALSDSCLPKNPWSKFPFS 135

Query: 181 GFIAMMASLGTLMVEFVGTQFFERRQRK 264
           GF AM+++L TL+V+FVGTQ++ER+Q +
Sbjct: 136 GFFAMVSALATLVVDFVGTQYYERKQER 163


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