BLASTX nr result

ID: Coptis21_contig00020275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020275
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284046.1| PREDICTED: queuine tRNA-ribosyltransferase [...   155   3e-36
ref|XP_002513971.1| queuine tRNA-ribosyltransferase, putative [R...   152   4e-35
ref|XP_002302315.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_003523806.1| PREDICTED: queuine tRNA-ribosyltransferase-l...   147   9e-34
ref|XP_003527895.1| PREDICTED: queuine tRNA-ribosyltransferase-l...   145   3e-33

>ref|XP_002284046.1| PREDICTED: queuine tRNA-ribosyltransferase [Vitis vinifera]
           gi|302142000|emb|CBI19203.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/80 (88%), Positives = 74/80 (92%)
 Frame = -3

Query: 245 KHKAMADDVRPIDPTCTCMVCKNYTRAYIHSLVTKDAMGSQLLSYHNLFYMMKLSRDLHV 66
           KHKAMADD RPIDP C CMVCKNYTRAYIH LVTKDAMGSQLLSYHNL+YMMKLSRDLH 
Sbjct: 288 KHKAMADDTRPIDPACMCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMKLSRDLHS 347

Query: 65  SIVQQRFPEFVCGFLQKMFP 6
           SI+Q+RFPEFVC FLQKMFP
Sbjct: 348 SIIQERFPEFVCEFLQKMFP 367


>ref|XP_002513971.1| queuine tRNA-ribosyltransferase, putative [Ricinus communis]
           gi|223547057|gb|EEF48554.1| queuine
           tRNA-ribosyltransferase, putative [Ricinus communis]
          Length = 403

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/80 (87%), Positives = 72/80 (90%)
 Frame = -3

Query: 245 KHKAMADDVRPIDPTCTCMVCKNYTRAYIHSLVTKDAMGSQLLSYHNLFYMMKLSRDLHV 66
           KH AMADD RPIDPTC CMVCK YTRAYIH LVTKDAMGSQLLSYHNL+YMMKLSRDLH 
Sbjct: 293 KHSAMADDTRPIDPTCACMVCKKYTRAYIHCLVTKDAMGSQLLSYHNLYYMMKLSRDLHS 352

Query: 65  SIVQQRFPEFVCGFLQKMFP 6
           SIV+ RFPEFVC FLQKMFP
Sbjct: 353 SIVEGRFPEFVCNFLQKMFP 372


>ref|XP_002302315.1| predicted protein [Populus trichocarpa] gi|222844041|gb|EEE81588.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/80 (83%), Positives = 75/80 (93%)
 Frame = -3

Query: 245 KHKAMADDVRPIDPTCTCMVCKNYTRAYIHSLVTKDAMGSQLLSYHNLFYMMKLSRDLHV 66
           KHKAMA+D RPIDPTC+CMVCKNYTRAYIH LVTKDAMGSQLLSYHNL YM++LSRDLH 
Sbjct: 288 KHKAMAEDTRPIDPTCSCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLHYMLQLSRDLHS 347

Query: 65  SIVQQRFPEFVCGFLQKMFP 6
           SI+++RFP+FV GFLQKMFP
Sbjct: 348 SIIEERFPDFVRGFLQKMFP 367


>ref|XP_003523806.1| PREDICTED: queuine tRNA-ribosyltransferase-like [Glycine max]
          Length = 452

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/80 (83%), Positives = 73/80 (91%)
 Frame = -3

Query: 245 KHKAMADDVRPIDPTCTCMVCKNYTRAYIHSLVTKDAMGSQLLSYHNLFYMMKLSRDLHV 66
           KHKAMADD RPIDPTC CMVCKNY+RAYIH LVTKDAMGSQLLSYHNL+YM++LSR+LH 
Sbjct: 328 KHKAMADDTRPIDPTCPCMVCKNYSRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHS 387

Query: 65  SIVQQRFPEFVCGFLQKMFP 6
           SIV+ RFPEFVC FL KMFP
Sbjct: 388 SIVEGRFPEFVCDFLHKMFP 407


>ref|XP_003527895.1| PREDICTED: queuine tRNA-ribosyltransferase-like [Glycine max]
          Length = 469

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/80 (82%), Positives = 73/80 (91%)
 Frame = -3

Query: 245 KHKAMADDVRPIDPTCTCMVCKNYTRAYIHSLVTKDAMGSQLLSYHNLFYMMKLSRDLHV 66
           KHKAMADD RPIDPTC CMVCK Y+RAYIH LVTKDAMGSQLLSYHNL+YM++LSR+LH 
Sbjct: 288 KHKAMADDTRPIDPTCPCMVCKTYSRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHS 347

Query: 65  SIVQQRFPEFVCGFLQKMFP 6
           SIV+ RFPEFVC FL+KMFP
Sbjct: 348 SIVEGRFPEFVCDFLRKMFP 367


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