BLASTX nr result

ID: Coptis21_contig00020269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020269
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522969.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   201   4e-50
gb|AEO86798.1| methionine synthase [Camellia sinensis]                201   5e-50
dbj|BAE07181.1| methionine synthase [Beta vulgaris]                   200   9e-50
ref|XP_002319710.1| vitamin-b12 independent methionine synthase,...   200   1e-49
ref|XP_002276438.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   199   1e-49

>ref|XP_003522969.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like [Glycine max]
          Length = 799

 Score =  201 bits (512), Expect = 4e-50
 Identities = 96/119 (80%), Positives = 105/119 (88%)
 Frame = -1

Query: 358 VRYKCIRAMTSHIVGYPRMGPKRELKFSLESFWDKKTNGDELQKVAKDLRVSIWKQMSGA 179
           VR    RAM SHIVGYPRMGPKRELKF+LESFWD K++ D+LQKVA DLR +IWKQM+ A
Sbjct: 31  VRATSSRAMASHIVGYPRMGPKRELKFALESFWDGKSSADDLQKVAADLRSAIWKQMADA 90

Query: 178 GIKYIPSNTFSYYDQVLDTSAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 2
           GIKYIPSNTFSYYDQVLDT+AMLGAVP RY W GGEIGFDVYFSMARGN ++PAMEMTK
Sbjct: 91  GIKYIPSNTFSYYDQVLDTTAMLGAVPSRYNWNGGEIGFDVYFSMARGNSSVPAMEMTK 149


>gb|AEO86798.1| methionine synthase [Camellia sinensis]
          Length = 765

 Score =  201 bits (511), Expect = 5e-50
 Identities = 93/111 (83%), Positives = 103/111 (92%)
 Frame = -1

Query: 334 MTSHIVGYPRMGPKRELKFSLESFWDKKTNGDELQKVAKDLRVSIWKQMSGAGIKYIPSN 155
           M SHIVGYPRMGPKRELKF+LESFWDKK++ ++L+KVA DLR SIWKQM+ AGIKYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVAADLRSSIWKQMASAGIKYIPSN 60

Query: 154 TFSYYDQVLDTSAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 2
           TFSYYDQVLDT+AMLGAVPPRYGWTGGEIGFD YFSMARGN ++PAMEM K
Sbjct: 61  TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMAK 111


>dbj|BAE07181.1| methionine synthase [Beta vulgaris]
          Length = 794

 Score =  200 bits (509), Expect = 9e-50
 Identities = 94/111 (84%), Positives = 103/111 (92%)
 Frame = -1

Query: 334 MTSHIVGYPRMGPKRELKFSLESFWDKKTNGDELQKVAKDLRVSIWKQMSGAGIKYIPSN 155
           M SHIVGYPRMGPKRELKF+LESFWD K++ D+L+KV+ DLR SIWKQMS AGIKYIPSN
Sbjct: 10  MASHIVGYPRMGPKRELKFALESFWDGKSSADDLKKVSADLRSSIWKQMSDAGIKYIPSN 69

Query: 154 TFSYYDQVLDTSAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 2
           TF+YYDQVLDT+AMLGAVPPRYGWTGGEI FDVYFSMARGN T+PAMEMTK
Sbjct: 70  TFAYYDQVLDTTAMLGAVPPRYGWTGGEIEFDVYFSMARGNATVPAMEMTK 120


>ref|XP_002319710.1| vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa] gi|222858086|gb|EEE95633.1|
           vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa]
          Length = 765

 Score =  200 bits (508), Expect = 1e-49
 Identities = 93/111 (83%), Positives = 103/111 (92%)
 Frame = -1

Query: 334 MTSHIVGYPRMGPKRELKFSLESFWDKKTNGDELQKVAKDLRVSIWKQMSGAGIKYIPSN 155
           M SHIVGYPRMGPKRELKF+LESFWD K++ ++LQKVA DLR SIWKQM+ AGIKYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRESIWKQMTDAGIKYIPSN 60

Query: 154 TFSYYDQVLDTSAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 2
           TFSYYDQ+LDT+AMLGAVPPRYGW GGEIGFDVYFSMARGN ++PAMEMTK
Sbjct: 61  TFSYYDQMLDTTAMLGAVPPRYGWNGGEIGFDVYFSMARGNASVPAMEMTK 111


>ref|XP_002276438.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Vitis vinifera]
          Length = 765

 Score =  199 bits (507), Expect = 1e-49
 Identities = 93/111 (83%), Positives = 102/111 (91%)
 Frame = -1

Query: 334 MTSHIVGYPRMGPKRELKFSLESFWDKKTNGDELQKVAKDLRVSIWKQMSGAGIKYIPSN 155
           M SHIVGYPRMGPKRELKF+LESFWDKK++ ++LQKVA DLR SIWKQM+ AG KYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQKVAADLRASIWKQMADAGTKYIPSN 60

Query: 154 TFSYYDQVLDTSAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 2
           TFSYYDQVLDT+AMLGAVPPRYGW GGEI FDVYFSMARGN ++PAMEMTK
Sbjct: 61  TFSYYDQVLDTTAMLGAVPPRYGWNGGEIEFDVYFSMARGNASVPAMEMTK 111


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