BLASTX nr result

ID: Coptis21_contig00020268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020268
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO38219.1| RCa8 [Manihot esculenta]                               127   1e-27
gb|ABV30814.1| NBS-containing resistance-like protein [Platanus ...   120   1e-25
gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Ger...   114   8e-24
gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Ge...   114   8e-24
gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Ge...   114   8e-24

>gb|AAO38219.1| RCa8 [Manihot esculenta]
          Length = 231

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/87 (68%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   LLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEITVEVL 181
           LL +KKFVLILDDLW  F LE++GIPQP   NGCKLV  TRL+EVCRGMET +EI V+VL
Sbjct: 67  LLARKKFVLILDDLWYGFSLEEVGIPQPTNANGCKLVVITRLLEVCRGMETHREIKVDVL 126

Query: 182 SKEEAWDLFVHKVGSDVMSSPEIERTA 262
           SKEEAWDLF+ K G D + SPE+E  A
Sbjct: 127 SKEEAWDLFIDKAGRDAILSPEVETVA 153


>gb|ABV30814.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 157

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = +2

Query: 2   LLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEITVEVL 181
           L R+K+F+LILDD+W  FPLE +GIP P  ENGCKL+ TTRL  VCRGMET++ + V VL
Sbjct: 63  LERRKRFILILDDMWEAFPLENVGIPNPTRENGCKLLLTTRLKGVCRGMETERNVEVRVL 122

Query: 182 SKEEAWDLFVHKVGSDVMSSPEIERTA 262
           SK+EAWDLF  KVG DV+ S +I+  A
Sbjct: 123 SKDEAWDLFKQKVGEDVLHSSDIQALA 149


>gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Gerbera hybrid
           cultivar] gi|408905175|gb|AFU97134.1| NB-LRR
           resistance-like protein RC81, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/74 (70%), Positives = 62/74 (83%)
 Frame = +2

Query: 5   LRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEITVEVLS 184
           L+ KKFVLILDD+W KF LE++GIPQP+  NGCK VF TRLMEVCRGMETQ+EI V++LS
Sbjct: 68  LQGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVFVTRLMEVCRGMETQREIRVDLLS 127

Query: 185 KEEAWDLFVHKVGS 226
           K+E+W LF  K GS
Sbjct: 128 KKESWSLFTSKSGS 141


>gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Gerbera hybrid
           cultivar]
          Length = 166

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/74 (70%), Positives = 62/74 (83%)
 Frame = +2

Query: 5   LRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEITVEVLS 184
           L+ KKFVLILDD+W KF LE++GIPQP+  NGCK VF TRLMEVCRGMETQ+EI V++LS
Sbjct: 68  LQGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVFVTRLMEVCRGMETQREIRVDLLS 127

Query: 185 KEEAWDLFVHKVGS 226
           K+E+W LF  K GS
Sbjct: 128 KKESWSLFTSKSGS 141


>gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Gerbera hybrid
           cultivar]
          Length = 164

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/74 (70%), Positives = 62/74 (83%)
 Frame = +2

Query: 5   LRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEITVEVLS 184
           L+ KKFVLILDD+W KF LE++GIPQP+  NGCK VF TRLMEVCRGMETQ+EI V++LS
Sbjct: 68  LQGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVFVTRLMEVCRGMETQREIRVDLLS 127

Query: 185 KEEAWDLFVHKVGS 226
           K+E+W LF  K GS
Sbjct: 128 KKESWSLFTSKSGS 141


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