BLASTX nr result

ID: Coptis21_contig00020255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020255
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270003.1| PREDICTED: expansin-A13-like [Vitis vinifera]     416   e-114
ref|XP_004148906.1| PREDICTED: expansin-A13-like [Cucumis sativu...   398   e-108
ref|XP_002884363.1| ATEXPA13 [Arabidopsis lyrata subsp. lyrata] ...   398   e-108
ref|XP_002526588.1| Alpha-expansin 13 precursor, putative [Ricin...   394   e-107
ref|XP_003616175.1| Expansin [Medicago truncatula] gi|355517510|...   393   e-107

>ref|XP_002270003.1| PREDICTED: expansin-A13-like [Vitis vinifera]
          Length = 313

 Score =  416 bits (1068), Expect = e-114
 Identities = 191/240 (79%), Positives = 213/240 (88%)
 Frame = -2

Query: 1124 SYTSPSSSNYLTEWKTARATFYAASDPRDAVAGACGYGDLVKRGFGMATVGLSTALFERG 945
            S +S SSS  L+EW++ RAT+YAA+DPRDAV GACGYGDLVK G+GMATVGLS ALFERG
Sbjct: 75   SSSSSSSSATLSEWRSGRATYYAAADPRDAVGGACGYGDLVKSGYGMATVGLSEALFERG 134

Query: 944  QICGGCFELRCVDDLRWCHQGTSIIVTATNFCPPNYGLEGDGGGGHCNPPNKHFVLPIDA 765
            QICGGCFELRCVDDLRWC  GTSIIVTATNFC PNYG   DGGG HCNPPN HFVLPI+A
Sbjct: 135  QICGGCFELRCVDDLRWCIPGTSIIVTATNFCAPNYGFPADGGG-HCNPPNNHFVLPIEA 193

Query: 764  FEKIAFWKASNMNVHYRRIKCVREGGVRFIIDGSGYFISVLISNVAGAGDVLAVKIKGSR 585
            FEKIA WKA+NM VHYRRIKC +EGGVRF +DGSG F+SVLISNV GAGD++ VK+KGSR
Sbjct: 194  FEKIAIWKAANMPVHYRRIKCRKEGGVRFSLDGSGIFLSVLISNVGGAGDIVGVKVKGSR 253

Query: 584  TGWLPMGRNWGQTWHVSADLKNQPLSFEVTTSDGVTVTSYNVAPKNWSFGQTFVGKQFQS 405
            TGWLPMGRNWGQ WH++ADLKNQPLSFE+T SDG+T+TSYNVAPK W+FGQTF GKQF+S
Sbjct: 254  TGWLPMGRNWGQNWHLNADLKNQPLSFEITASDGITLTSYNVAPKGWNFGQTFEGKQFES 313


>ref|XP_004148906.1| PREDICTED: expansin-A13-like [Cucumis sativus]
            gi|449484934|ref|XP_004157021.1| PREDICTED:
            expansin-A13-like [Cucumis sativus]
          Length = 268

 Score =  398 bits (1023), Expect = e-108
 Identities = 183/240 (76%), Positives = 209/240 (87%)
 Frame = -2

Query: 1124 SYTSPSSSNYLTEWKTARATFYAASDPRDAVAGACGYGDLVKRGFGMATVGLSTALFERG 945
            S  SP SS  L++W++ARAT+YAASDPRDAV GACGYGDLVK G+GMATVGLS +LFERG
Sbjct: 30   SSPSPDSSPSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERG 89

Query: 944  QICGGCFELRCVDDLRWCHQGTSIIVTATNFCPPNYGLEGDGGGGHCNPPNKHFVLPIDA 765
            QICG CF+LRCV+DLRWC  GTSIIVT TNFC PNYG   +GGG HCNPPNKHFVLPI+A
Sbjct: 90   QICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGG-HCNPPNKHFVLPIEA 148

Query: 764  FEKIAFWKASNMNVHYRRIKCVREGGVRFIIDGSGYFISVLISNVAGAGDVLAVKIKGSR 585
            FEKIA WKA NM V YRRIKC +EGG+R+ + G G ++SVLISNVAGAGDV AVKIKG+R
Sbjct: 149  FEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGTR 208

Query: 584  TGWLPMGRNWGQTWHVSADLKNQPLSFEVTTSDGVTVTSYNVAPKNWSFGQTFVGKQFQS 405
            TGWLPMGRNWGQ WH++ADL +Q LSFEVT+SDGVT+TSYNVAPK+W+FGQTF GKQF+S
Sbjct: 209  TGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFES 268


>ref|XP_002884363.1| ATEXPA13 [Arabidopsis lyrata subsp. lyrata]
            gi|297330203|gb|EFH60622.1| ATEXPA13 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 266

 Score =  398 bits (1022), Expect = e-108
 Identities = 188/243 (77%), Positives = 209/243 (86%), Gaps = 3/243 (1%)
 Frame = -2

Query: 1124 SYTSPSSSNY---LTEWKTARATFYAASDPRDAVAGACGYGDLVKRGFGMATVGLSTALF 954
            S +SPSSS+     +EW+ ARAT+YAAS+PRDAV GACGYGDLVK G+GMATVGLS  LF
Sbjct: 24   STSSPSSSSVSSDASEWRPARATYYAASNPRDAVGGACGYGDLVKSGYGMATVGLSETLF 83

Query: 953  ERGQICGGCFELRCVDDLRWCHQGTSIIVTATNFCPPNYGLEGDGGGGHCNPPNKHFVLP 774
            ERGQICG CFELRCVDDLRWC  GTSIIVTATNFC PNYG + DGGG HCNPPNKHFVLP
Sbjct: 84   ERGQICGACFELRCVDDLRWCIPGTSIIVTATNFCAPNYGFDPDGGG-HCNPPNKHFVLP 142

Query: 773  IDAFEKIAFWKASNMNVHYRRIKCVREGGVRFIIDGSGYFISVLISNVAGAGDVLAVKIK 594
            I+AFEKIA WKA NM V YRRI C REG +RF +DG G FISVLI+NVAG+GDV AVKIK
Sbjct: 143  IEAFEKIAIWKAGNMPVQYRRINCRREGSMRFTVDGGGIFISVLITNVAGSGDVAAVKIK 202

Query: 593  GSRTGWLPMGRNWGQTWHVSADLKNQPLSFEVTTSDGVTVTSYNVAPKNWSFGQTFVGKQ 414
            GSRTGWLPMGRNWGQ WH++ADLKNQ LSFEVT+SD  TVTSYNV+PKNW++GQTF GKQ
Sbjct: 203  GSRTGWLPMGRNWGQNWHINADLKNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQ 262

Query: 413  FQS 405
            F++
Sbjct: 263  FET 265


>ref|XP_002526588.1| Alpha-expansin 13 precursor, putative [Ricinus communis]
            gi|223534082|gb|EEF35800.1| Alpha-expansin 13 precursor,
            putative [Ricinus communis]
          Length = 269

 Score =  394 bits (1011), Expect = e-107
 Identities = 180/238 (75%), Positives = 205/238 (86%)
 Frame = -2

Query: 1118 TSPSSSNYLTEWKTARATFYAASDPRDAVAGACGYGDLVKRGFGMATVGLSTALFERGQI 939
            T+P  S  L EW++A A +YAASDPRD+V GACGYGDL + G+G+ATVGLS A+FERGQI
Sbjct: 33   TTPPPSTSLPEWRSAHAMYYAASDPRDSVGGACGYGDLKQAGYGLATVGLSEAMFERGQI 92

Query: 938  CGGCFELRCVDDLRWCHQGTSIIVTATNFCPPNYGLEGDGGGGHCNPPNKHFVLPIDAFE 759
            CG CFELRCV+DLRWC  GTS+IVT TNFC PNYG   DGGG HCNPPN HFVLPI+++E
Sbjct: 93   CGACFELRCVEDLRWCIPGTSVIVTVTNFCAPNYGFPSDGGG-HCNPPNLHFVLPIESYE 151

Query: 758  KIAFWKASNMNVHYRRIKCVREGGVRFIIDGSGYFISVLISNVAGAGDVLAVKIKGSRTG 579
            KIA WKA NM V YRRIKC +EGG+RF + GS  FISVLISNVAGAGDV+AVKIKGSRTG
Sbjct: 152  KIAIWKAGNMPVQYRRIKCRKEGGIRFTVSGSTIFISVLISNVAGAGDVVAVKIKGSRTG 211

Query: 578  WLPMGRNWGQTWHVSADLKNQPLSFEVTTSDGVTVTSYNVAPKNWSFGQTFVGKQFQS 405
            WLPMGRNWGQ WH++ADLKNQPLSFEVT+SDG+TVTSYNVAPK+W+FGQTF GKQF +
Sbjct: 212  WLPMGRNWGQNWHINADLKNQPLSFEVTSSDGLTVTSYNVAPKDWNFGQTFEGKQFMT 269


>ref|XP_003616175.1| Expansin [Medicago truncatula] gi|355517510|gb|AES99133.1| Expansin
            [Medicago truncatula]
          Length = 266

 Score =  393 bits (1010), Expect = e-107
 Identities = 185/235 (78%), Positives = 201/235 (85%)
 Frame = -2

Query: 1115 SPSSSNYLTEWKTARATFYAASDPRDAVAGACGYGDLVKRGFGMATVGLSTALFERGQIC 936
            S  SS   TEW++ARATFYA  DPRD V GACGYGDL K G+GM+TVGLS ALFERGQIC
Sbjct: 31   SQQSSPSFTEWRSARATFYAQVDPRDTVGGACGYGDLTKAGYGMSTVGLSEALFERGQIC 90

Query: 935  GGCFELRCVDDLRWCHQGTSIIVTATNFCPPNYGLEGDGGGGHCNPPNKHFVLPIDAFEK 756
            G CFELRCVDDLRWC  GTSIIVTATNFC PNYG   +GGG HCNPPNKHFVLPIDAFEK
Sbjct: 91   GACFELRCVDDLRWCIPGTSIIVTATNFCAPNYGFTVEGGG-HCNPPNKHFVLPIDAFEK 149

Query: 755  IAFWKASNMNVHYRRIKCVREGGVRFIIDGSGYFISVLISNVAGAGDVLAVKIKGSRTGW 576
            IA WKA NM + YRRIKC REGGVRF + GSG FISVLISNVAG GD++AVK+KGSRTGW
Sbjct: 150  IAIWKAGNMPLQYRRIKCRREGGVRFTVTGSGIFISVLISNVAGHGDIVAVKVKGSRTGW 209

Query: 575  LPMGRNWGQTWHVSADLKNQPLSFEVTTSDGVTVTSYNVAPKNWSFGQTFVGKQF 411
            L MGRNWGQ WH++A L+NQPLSFEVT+SDG TVT+YNVAPK+WSFGQTF GKQF
Sbjct: 210  LSMGRNWGQNWHINALLQNQPLSFEVTSSDGKTVTAYNVAPKDWSFGQTFEGKQF 264