BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020246
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32334.3| unnamed protein product [Vitis vinifera]              225   3e-57
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140...   225   3e-57
ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arab...   225   4e-57
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian...   223   2e-56
gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]                 223   2e-56

>emb|CBI32334.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  225 bits (574), Expect = 3e-57
 Identities = 110/135 (81%), Positives = 120/135 (88%)
 Frame = -3

Query: 550 NISHVRDLSSMLTSAVEDPTAASGKIFNCVSDCAVTLDGMAKLCAQTAGRSVRMVHYNPK 371
           NI+HVRDLSSMLT AVE+P AASG IFNCVSD AVTLDGMAKLCAQ AGR V +VHY+PK
Sbjct: 150 NIAHVRDLSSMLTLAVENPAAASGNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPK 209

Query: 370 DVGVDAKKAFPFRNMHFYAEPRTAKEILGWSSSTNLPEDLKERFEEYVKIGRDKKPIKFE 191
            VG+DAKKAFPFRNMHFYAEPR AK+ILGW   TNLPEDLKERF+EYVKIGRDKKP+KFE
Sbjct: 210 AVGIDAKKAFPFRNMHFYAEPRAAKDILGWHGITNLPEDLKERFDEYVKIGRDKKPMKFE 269

Query: 190 TDDKILEALQVVVPV 146
            DDKILE+L+V V V
Sbjct: 270 IDDKILESLKVSVAV 284


>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
           vinifera] gi|147789789|emb|CAN73874.1| hypothetical
           protein VITISV_039540 [Vitis vinifera]
          Length = 397

 Score =  225 bits (574), Expect = 3e-57
 Identities = 110/135 (81%), Positives = 120/135 (88%)
 Frame = -3

Query: 550 NISHVRDLSSMLTSAVEDPTAASGKIFNCVSDCAVTLDGMAKLCAQTAGRSVRMVHYNPK 371
           NI+HVRDLSSMLT AVE+P AASG IFNCVSD AVTLDGMAKLCAQ AGR V +VHY+PK
Sbjct: 263 NIAHVRDLSSMLTLAVENPAAASGNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPK 322

Query: 370 DVGVDAKKAFPFRNMHFYAEPRTAKEILGWSSSTNLPEDLKERFEEYVKIGRDKKPIKFE 191
            VG+DAKKAFPFRNMHFYAEPR AK+ILGW   TNLPEDLKERF+EYVKIGRDKKP+KFE
Sbjct: 323 AVGIDAKKAFPFRNMHFYAEPRAAKDILGWHGITNLPEDLKERFDEYVKIGRDKKPMKFE 382

Query: 190 TDDKILEALQVVVPV 146
            DDKILE+L+V V V
Sbjct: 383 IDDKILESLKVSVAV 397


>ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
           lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein
           ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]
          Length = 408

 Score =  225 bits (573), Expect = 4e-57
 Identities = 111/133 (83%), Positives = 118/133 (88%)
 Frame = -3

Query: 550 NISHVRDLSSMLTSAVEDPTAASGKIFNCVSDCAVTLDGMAKLCAQTAGRSVRMVHYNPK 371
           NISHVRDLSSMLTSAV +P AASG IFNCVSD AVTLDGMAKLCA  AG++V +VHY+PK
Sbjct: 274 NISHVRDLSSMLTSAVTNPKAASGNIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPK 333

Query: 370 DVGVDAKKAFPFRNMHFYAEPRTAKEILGWSSSTNLPEDLKERFEEYVKIGRDKKPIKFE 191
            +GVDAKKAFPFRNMHFYAEPR AKEILGW S TNLPEDLKERFEEYVKIGRDKK IKFE
Sbjct: 334 AIGVDAKKAFPFRNMHFYAEPRAAKEILGWESKTNLPEDLKERFEEYVKIGRDKKEIKFE 393

Query: 190 TDDKILEALQVVV 152
            DDKILEAL+  V
Sbjct: 394 LDDKILEALKTPV 406


>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
          Length = 405

 Score =  223 bits (568), Expect = 2e-56
 Identities = 109/133 (81%), Positives = 122/133 (91%)
 Frame = -3

Query: 550 NISHVRDLSSMLTSAVEDPTAASGKIFNCVSDCAVTLDGMAKLCAQTAGRSVRMVHYNPK 371
           NI+HVRDLSSMLT+AV++P AASG IFNCVSD AVTLDGMAKLCA+ AG SV +VHY+PK
Sbjct: 271 NIAHVRDLSSMLTAAVQNPAAASGHIFNCVSDRAVTLDGMAKLCAKAAGFSVEIVHYDPK 330

Query: 370 DVGVDAKKAFPFRNMHFYAEPRTAKEILGWSSSTNLPEDLKERFEEYVKIGRDKKPIKFE 191
            VGVDAKKAFPFRNMHFY+EPR AKEILGWS++TNLPEDLKERF+EYVKIGRDKK +KFE
Sbjct: 331 AVGVDAKKAFPFRNMHFYSEPRAAKEILGWSATTNLPEDLKERFDEYVKIGRDKKEMKFE 390

Query: 190 TDDKILEALQVVV 152
            DDKILEAL+V V
Sbjct: 391 LDDKILEALKVPV 403


>gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
          Length = 169

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/133 (81%), Positives = 121/133 (90%)
 Frame = -3

Query: 550 NISHVRDLSSMLTSAVEDPTAASGKIFNCVSDCAVTLDGMAKLCAQTAGRSVRMVHYNPK 371
           NI+HVRDLSSMLT AV++P AASG IFNCVSD AVTLDGMA+LCA+ AG SV +VHY+PK
Sbjct: 35  NIAHVRDLSSMLTLAVQNPAAASGHIFNCVSDRAVTLDGMARLCAKAAGTSVEIVHYDPK 94

Query: 370 DVGVDAKKAFPFRNMHFYAEPRTAKEILGWSSSTNLPEDLKERFEEYVKIGRDKKPIKFE 191
            VGVDAKKAFPFRNMHFYAEPR AKEILGWS++TNLPEDLKERFEEYVKIGRDKK +KFE
Sbjct: 95  AVGVDAKKAFPFRNMHFYAEPRAAKEILGWSATTNLPEDLKERFEEYVKIGRDKKEMKFE 154

Query: 190 TDDKILEALQVVV 152
            DDKILE+L+V V
Sbjct: 155 LDDKILESLKVPV 167