BLASTX nr result

ID: Coptis21_contig00020242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020242
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33379.3| unnamed protein product [Vitis vinifera]              218   7e-55
ref|XP_002332424.1| cytokinin oxidase [Populus trichocarpa] gi|2...   218   1e-54
emb|CBI28611.3| unnamed protein product [Vitis vinifera]              216   5e-54
ref|XP_002513118.1| Cytokinin dehydrogenase, putative [Ricinus c...   215   8e-54
ref|XP_002304773.1| cytokinin oxidase [Populus trichocarpa] gi|2...   213   4e-53

>emb|CBI33379.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  218 bits (556), Expect = 7e-55
 Identities = 107/180 (59%), Positives = 139/180 (77%), Gaps = 1/180 (0%)
 Frame = +3

Query: 162 MGSPPISFLK-QNNKFLRYFIVMFLSCMTARINLGSKLPYTNSDILDFNPLDGPSTLRTL 338
           MGS   SF + +N  F R F+++FLS +T R+NL S LP  +  + +       S+L+T+
Sbjct: 1   MGSFSYSFFRLKNTIFFRIFMILFLSSITHRMNLCSNLPLADPSLPNLGSSYVLSSLKTI 60

Query: 339 NLHGHFSFDDVHHAAKDFGNQYQYYPLAILRPKSVSDISTTIKHIFQMGPASKLTVAARG 518
           +L GHF+FD+++HAA DFGN++ Y P AIL PKSVSDIS+TIKHIF+MGPA++LT+AARG
Sbjct: 61  HLDGHFNFDNIYHAANDFGNRHHYLPSAILHPKSVSDISSTIKHIFEMGPATELTIAARG 120

Query: 519 HGHSTQGQAQVHGGVVISMESLQRPDIQIYTEKLPYVDVSGGELWINILRKSLKYGLAPK 698
           HGHS QGQAQ H GVV++MESLQ P   ++T K+PY DVSGGELWINIL +SLK+GLAPK
Sbjct: 121 HGHSVQGQAQAHRGVVVNMESLQAPKTIVHTGKMPYADVSGGELWINILHESLKHGLAPK 180


>ref|XP_002332424.1| cytokinin oxidase [Populus trichocarpa] gi|222832377|gb|EEE70854.1|
           cytokinin oxidase [Populus trichocarpa]
          Length = 530

 Score =  218 bits (554), Expect = 1e-54
 Identities = 111/180 (61%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
 Frame = +3

Query: 162 MGSPPISFLKQNNK-FLRYFIVMFLSCMTARINLGSKLPYTNSDILDFNPLDGPSTLRTL 338
           M  PP+S LKQ N  F+R F+++FLSCMT  INL                   PS+LRTL
Sbjct: 1   MRYPPVSILKQTNMLFVRSFLILFLSCMTITINLCFS--------------SNPSSLRTL 46

Query: 339 NLHGHFSFDDVHHAAKDFGNQYQYYPLAILRPKSVSDISTTIKHIFQMGPASKLTVAARG 518
           ++ GHFSFD+VHHAAKDFGN++Q  PLA+L PKSVSDI+TTI+HI+QMGP S+LTVAARG
Sbjct: 47  SVDGHFSFDEVHHAAKDFGNRFQLLPLAVLYPKSVSDIATTIRHIWQMGPDSELTVAARG 106

Query: 519 HGHSTQGQAQVHGGVVISMESLQRPDIQIYTEKLPYVDVSGGELWINILRKSLKYGLAPK 698
           H HS QGQAQ H GVVI+MESLQ   + +Y+   PYVD SGGELW++ILR+ LKYGLAPK
Sbjct: 107 HSHSLQGQAQAHQGVVINMESLQVHKMHVYSGNYPYVDASGGELWMDILRECLKYGLAPK 166


>emb|CBI28611.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  216 bits (549), Expect = 5e-54
 Identities = 109/183 (59%), Positives = 137/183 (74%), Gaps = 1/183 (0%)
 Frame = +3

Query: 153 KTKMGSPPISFLKQNN-KFLRYFIVMFLSCMTARINLGSKLPYTNSDILDFNPLDGPSTL 329
           K KM  P ISFL+ ++ +F+  F+++FL C+TA I+L   LP              PS+L
Sbjct: 28  KKKMRYPAISFLRPSSIRFIASFVILFLGCLTANISLC--LPII------------PSSL 73

Query: 330 RTLNLHGHFSFDDVHHAAKDFGNQYQYYPLAILRPKSVSDISTTIKHIFQMGPASKLTVA 509
            TL++ GHFSF  + HAA+DFGN+YQ+ P A+L PKSVSDI+ TIKH++QMGP S+LTVA
Sbjct: 74  ETLSVDGHFSFHGIEHAARDFGNRYQFLPQAVLHPKSVSDIAMTIKHVWQMGPGSELTVA 133

Query: 510 ARGHGHSTQGQAQVHGGVVISMESLQRPDIQIYTEKLPYVDVSGGELWINILRKSLKYGL 689
           ARGHGHS QGQAQ H G+VI+MESLQ  ++Q+YT   PYVDVSGGELWINIL +SLKYGL
Sbjct: 134 ARGHGHSLQGQAQAHQGIVINMESLQGTEMQVYTGNFPYVDVSGGELWINILHESLKYGL 193

Query: 690 APK 698
           APK
Sbjct: 194 APK 196


>ref|XP_002513118.1| Cytokinin dehydrogenase, putative [Ricinus communis]
           gi|223548129|gb|EEF49621.1| Cytokinin dehydrogenase,
           putative [Ricinus communis]
          Length = 530

 Score =  215 bits (547), Expect = 8e-54
 Identities = 110/176 (62%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
 Frame = +3

Query: 174 PISFLKQNNK-FLRYFIVMFLSCMTARINLGSKLPYTNSDILDFNPLDGPSTLRTLNLHG 350
           PIS  K NN  F+R F+++ LSCMT RINL                   PS+L+TL++ G
Sbjct: 5   PISSHKLNNMLFIRGFMILLLSCMTVRINLCFS--------------GNPSSLKTLSVQG 50

Query: 351 HFSFDDVHHAAKDFGNQYQYYPLAILRPKSVSDISTTIKHIFQMGPASKLTVAARGHGHS 530
           HF+FDD+H+AAKDFGN++Q  P A+L P+SVSDI+TTIKHI+QMGP S LTVAARGHGHS
Sbjct: 51  HFTFDDLHYAAKDFGNRFQLLPFAVLHPRSVSDIATTIKHIWQMGPHSDLTVAARGHGHS 110

Query: 531 TQGQAQVHGGVVISMESLQRPDIQIYTEKLPYVDVSGGELWINILRKSLKYGLAPK 698
             GQAQ H GVVI+MESLQ P +Q++  K PYVDVSGGELWINILR+SLK+GLAPK
Sbjct: 111 LHGQAQAHRGVVINMESLQGPKMQVHAGKHPYVDVSGGELWINILRESLKHGLAPK 166


>ref|XP_002304773.1| cytokinin oxidase [Populus trichocarpa] gi|222842205|gb|EEE79752.1|
           cytokinin oxidase [Populus trichocarpa]
          Length = 517

 Score =  213 bits (541), Expect = 4e-53
 Identities = 106/165 (64%), Positives = 126/165 (76%)
 Frame = +3

Query: 204 FLRYFIVMFLSCMTARINLGSKLPYTNSDILDFNPLDGPSTLRTLNLHGHFSFDDVHHAA 383
           F+R F+++FL CMT RINL                   PS+LRTL++ GHFSFDDVHHAA
Sbjct: 3   FIRSFMILFLCCMTIRINLCFS--------------SNPSSLRTLSVDGHFSFDDVHHAA 48

Query: 384 KDFGNQYQYYPLAILRPKSVSDISTTIKHIFQMGPASKLTVAARGHGHSTQGQAQVHGGV 563
           KDFGN++Q  PLA+L PKSVSDI+TTI+HI+QMGP S+LTVAARGH HS QGQAQ H GV
Sbjct: 49  KDFGNRFQLLPLAVLYPKSVSDIATTIRHIWQMGPNSELTVAARGHSHSLQGQAQAHQGV 108

Query: 564 VISMESLQRPDIQIYTEKLPYVDVSGGELWINILRKSLKYGLAPK 698
           VI+MESLQ P + +YT   PYVD SGGELWI+ILR+ L+YGLAPK
Sbjct: 109 VINMESLQGPKMHVYTGNNPYVDASGGELWIDILRECLEYGLAPK 153


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