BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020226
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...   147   2e-33
gb|AEP33770.1| organelle transcript processing 82, partial [Raph...   145   4e-33
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   144   1e-32
gb|AEP33759.1| organelle transcript processing 82, partial [Bras...   144   1e-32

>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  147 bits (370), Expect = 2e-33
 Identities = 68/140 (48%), Positives = 95/140 (67%)
 Frame = +3

Query: 6   IQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWSTLLAACRKHGDIEIGEIAAQKLV 185
           ++HYGC++DLLGRS L +EA+ LI+ M MEP  VIW +LL AC+ H ++E+GE+ AQKL+
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509

Query: 186 ELAPDYGGGYVLLSNLYANSCKWXXXXXXXXXXXXXXXXKVAGLSWIEVDGEIHEFLVGD 365
           ++ P   G YVLLSN+YA S +W                KV G S IE+D  +HEFL+GD
Sbjct: 510 KIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGD 569

Query: 366 KFHPRSMEIHRLLDAIQCKL 425
           KFHP++ EI+++L+ I   L
Sbjct: 570 KFHPQNKEIYKMLEEIDSLL 589


>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  145 bits (367), Expect = 4e-33
 Identities = 66/140 (47%), Positives = 93/140 (66%)
 Frame = +3

Query: 6   IQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWSTLLAACRKHGDIEIGEIAAQKLV 185
           ++HYGC++DLLG S L +EA+ +I  MPMEP  VIW +LL AC+KHG++E+ E  AQKL+
Sbjct: 440 LEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLI 499

Query: 186 ELAPDYGGGYVLLSNLYANSCKWXXXXXXXXXXXXXXXXKVAGLSWIEVDGEIHEFLVGD 365
           ++ P+  G YVLLSN+YA + +W                KV G S IEVD  +HEF++GD
Sbjct: 500 KIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGD 559

Query: 366 KFHPRSMEIHRLLDAIQCKL 425
           K HPR  EI+ +L+ +  +L
Sbjct: 560 KLHPRRREIYHMLEEMDVQL 579


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/140 (47%), Positives = 92/140 (65%)
 Frame = +3

Query: 9   QHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWSTLLAACRKHGDIEIGEIAAQKLVE 188
           QHYGC++DLLGR+ L  EA+ L+  M ++P   IW +LL ACR HG +E+GE+ A++L E
Sbjct: 500 QHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFE 559

Query: 189 LAPDYGGGYVLLSNLYANSCKWXXXXXXXXXXXXXXXXKVAGLSWIEVDGEIHEFLVGDK 368
           L PD  G YVLLSN+YA + KW                KV G + IEVD  +HEFLVGDK
Sbjct: 560 LEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDK 619

Query: 369 FHPRSMEIHRLLDAIQCKLR 428
            HP+S +I+R+L+ +  +L+
Sbjct: 620 VHPQSEDIYRMLEEVDEQLK 639


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  144 bits (363), Expect = 1e-32
 Identities = 66/140 (47%), Positives = 94/140 (67%)
 Frame = +3

Query: 6   IQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWSTLLAACRKHGDIEIGEIAAQKLV 185
           ++HYGC++DLLG S L +EAK +I  MPMEP  VIW +LL ACR+HG++E+ E  A+ L+
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497

Query: 186 ELAPDYGGGYVLLSNLYANSCKWXXXXXXXXXXXXXXXXKVAGLSWIEVDGEIHEFLVGD 365
           ++ P+  G YVLLSN+YA + +W                KV G S IE+D E+HEF+VGD
Sbjct: 498 KVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGD 557

Query: 366 KFHPRSMEIHRLLDAIQCKL 425
           K HPR+ EI+ +L+ ++  L
Sbjct: 558 KLHPRNREIYGMLEEMEALL 577


>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/140 (46%), Positives = 93/140 (66%)
 Frame = +3

Query: 6   IQHYGCLVDLLGRSNLVREAKMLIDYMPMEPGAVIWSTLLAACRKHGDIEIGEIAAQKLV 185
           ++HYGC++DLLG + L +EA+ +I  MPMEP  VIW +LL AC+ HG++E+ E  AQKL+
Sbjct: 456 LEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM 515

Query: 186 ELAPDYGGGYVLLSNLYANSCKWXXXXXXXXXXXXXXXXKVAGLSWIEVDGEIHEFLVGD 365
           E+ P+  G YVLLSN+YA + +W                KV G S IE+D  +HEF++GD
Sbjct: 516 EIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGD 575

Query: 366 KFHPRSMEIHRLLDAIQCKL 425
           K HP+S EI+R+L+ +   L
Sbjct: 576 KLHPQSREIYRMLEEMDVLL 595