BLASTX nr result

ID: Coptis21_contig00020221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020221
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156795.1| PREDICTED: tetratricopeptide repeat protein ...   216   4e-54
ref|XP_004151922.1| PREDICTED: tetratricopeptide repeat protein ...   216   4e-54
ref|XP_002526584.1| conserved hypothetical protein [Ricinus comm...   213   5e-53
ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein ...   212   8e-53
emb|CBI27694.3| unnamed protein product [Vitis vinifera]              212   8e-53

>ref|XP_004156795.1| PREDICTED: tetratricopeptide repeat protein 27-like [Cucumis
           sativus]
          Length = 416

 Score =  216 bits (551), Expect = 4e-54
 Identities = 132/281 (46%), Positives = 173/281 (61%), Gaps = 15/281 (5%)
 Frame = -1

Query: 799 ELRLLRCTLXXXXXXXXXXXPQHL--------IDNLLTSIEKGNYQEALNSEAAHLVFHF 644
           ELRLL CT                        +D L+ SI  G+YQ+AL S AA LV   
Sbjct: 13  ELRLLYCTFSSLPSDCPADSQTQTSRNRLHESLDILVNSILAGDYQKALASNAAQLVLGL 72

Query: 643 AHSYDYQNTILS--ADQFYSQVEYHVQKFLHDNNNDQE----RIFILLCIAVAAFLAFTQ 482
            +    Q T  +  A+Q Y+++    +KF+     ++E    R+ I++CIA+A+FL FTQ
Sbjct: 73  VNMSPCQFTDSTECAEQVYAELLECAEKFVISKFENEEDRLCRLMIVVCIAIASFLTFTQ 132

Query: 481 SNITGPCADKVSLFPFPQNNDNGNEIG-VAWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 305
           SN++GP      L   P         G V WD WAR+Q+M TGSDL GKF+ +QYIVFAK
Sbjct: 133 SNVSGPLE---GLARSPMAVIELKVEGFVEWDNWARHQLMFTGSDLFGKFTNIQYIVFAK 189

Query: 304 MLLSKIKDVLWEEEKGTSFMGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 125
           MLL++IKD+L++E   + + G+K+ISWWL RV+  QQRILD+ +SSLFD LQVL  E L 
Sbjct: 190 MLLTRIKDMLFKENTSSKY-GMKSISWWLARVLLCQQRILDERSSSLFDHLQVLMGEALV 248

Query: 124 HFGKVDNVESYWGTLLDEGEASTIVAMAHLEAGIVEYAYAR 2
            FG  +NV+SYWG  L EGEASTIV+M HLEAGI+EY Y R
Sbjct: 249 DFGIQENVKSYWGANLQEGEASTIVSMIHLEAGIMEYYYGR 289


>ref|XP_004151922.1| PREDICTED: tetratricopeptide repeat protein 27 homolog [Cucumis
           sativus]
          Length = 897

 Score =  216 bits (551), Expect = 4e-54
 Identities = 132/281 (46%), Positives = 173/281 (61%), Gaps = 15/281 (5%)
 Frame = -1

Query: 799 ELRLLRCTLXXXXXXXXXXXPQHL--------IDNLLTSIEKGNYQEALNSEAAHLVFHF 644
           ELRLL CT                        +D L+ SI  G+YQ+AL S AA LV   
Sbjct: 13  ELRLLYCTFSSLPSDCPADSQTQTSRNRLHESLDILVNSILAGDYQKALASNAAQLVLGL 72

Query: 643 AHSYDYQNTILS--ADQFYSQVEYHVQKFLHDNNNDQE----RIFILLCIAVAAFLAFTQ 482
            +    Q T  +  A+Q Y+++    +KF+     ++E    R+ I++CIA+A+FL FTQ
Sbjct: 73  VNMSPCQFTDSTECAEQVYAELLECAEKFVISKFENEEDRLCRLMIVVCIAIASFLTFTQ 132

Query: 481 SNITGPCADKVSLFPFPQNNDNGNEIG-VAWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 305
           SN++GP      L   P         G V WD WAR+Q+M TGSDL GKF+ +QYIVFAK
Sbjct: 133 SNVSGPLE---GLARSPMAVIELKVEGFVEWDNWARHQLMFTGSDLFGKFTNIQYIVFAK 189

Query: 304 MLLSKIKDVLWEEEKGTSFMGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 125
           MLL++IKD+L++E   + + G+K+ISWWL RV+  QQRILD+ +SSLFD LQVL  E L 
Sbjct: 190 MLLTRIKDMLFKENTSSKY-GMKSISWWLARVLLCQQRILDERSSSLFDHLQVLMGEALV 248

Query: 124 HFGKVDNVESYWGTLLDEGEASTIVAMAHLEAGIVEYAYAR 2
            FG  +NV+SYWG  L EGEASTIV+M HLEAGI+EY Y R
Sbjct: 249 DFGIQENVKSYWGANLQEGEASTIVSMIHLEAGIMEYYYGR 289


>ref|XP_002526584.1| conserved hypothetical protein [Ricinus communis]
           gi|223534078|gb|EEF35796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 891

 Score =  213 bits (542), Expect = 5e-53
 Identities = 130/294 (44%), Positives = 177/294 (60%), Gaps = 18/294 (6%)
 Frame = -1

Query: 829 KPMAIAIPQFELRLLRCTLXXXXXXXXXXXPQ------------HLIDNLLTSIEKGNYQ 686
           +P    +  +ELRLLRCT                           LI+ LL  IE GNY 
Sbjct: 5   QPQTELLRSYELRLLRCTFSLPPPSADERRHDGSDSNCNISYLHSLINELLNLIETGNYL 64

Query: 685 EALNSEAAHLVFHFAHSYDYQNTILSADQFYSQVEYHVQKFLHDNN---NDQE---RIFI 524
           EAL+S+A+ L      S        S DQ+YS++   V++F++++    +D E   R+ +
Sbjct: 65  EALSSDASKLFTVLPDS-------CSPDQYYSELVERVERFINNDGIGIDDVEVPCRVIL 117

Query: 523 LLCIAVAAFLAFTQSNITGPCADKVSLFPFPQNNDNGNEIGVAWDGWARNQIMSTGSDLC 344
           +L +A+AAFL FTQ NITGP  D+VS  P       G E  + W+ WARNQ+MS+G  L 
Sbjct: 118 VLSVAIAAFLFFTQCNITGPL-DEVSRCPVLFK---GGEF-IEWENWARNQLMSSGCHLL 172

Query: 343 GKFSLLQYIVFAKMLLSKIKDVLWEEEKGTSFMGIKTISWWLGRVIFIQQRILDDTTSSL 164
           GKFS LQ+IVF+K+L+ KIKD+L+      S  GI+TISWWL R++ +QQRILD+ +SSL
Sbjct: 173 GKFSNLQFIVFSKLLVMKIKDLLFGGSLA-SIYGIRTISWWLVRILLVQQRILDELSSSL 231

Query: 163 FDSLQVLNAEMLKHFGKVDNVESYWGTLLDEGEASTIVAMAHLEAGIVEYAYAR 2
           FD LQV   E L HFG ++ V +YWG  L + +AS IV+M HLEAGI+E+AY R
Sbjct: 232 FDLLQVYMGETLHHFGTLEQVTNYWGAKLLDEDASCIVSMVHLEAGIIEHAYGR 285


>ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein 27 homolog [Vitis
           vinifera]
          Length = 909

 Score =  212 bits (540), Expect = 8e-53
 Identities = 131/281 (46%), Positives = 167/281 (59%), Gaps = 14/281 (4%)
 Frame = -1

Query: 802 FELRLLRCTLXXXXXXXXXXXPQHLIDNLLTSI-------EKGNYQEALNSEAAHLVFHF 644
           +ELRLLRCT              H    LLT+I       E G Y E L+S+A   VF  
Sbjct: 14  YELRLLRCTTATQQQQPPPPQ-SHAATPLLTTIIDTLDLIEAGRYAEVLSSDATRNVFRL 72

Query: 643 AHSYDYQ---NTILSADQFYSQVEYHVQKFLHDNN-NDQERIF---ILLCIAVAAFLAFT 485
              +  Q   +++  AD+FYS++   V  FL D + N+ ER F   +++C+AV+AFL FT
Sbjct: 73  KDEFFSQFSDDSVDCADRFYSELMNRVDSFLVDESVNEVERGFRTVLVMCVAVSAFLGFT 132

Query: 484 QSNITGPCADKVSLFPFPQNNDNGNEIGVAWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 305
           Q N+TGP  D + L P   N          W+ WAR QIMS+GSDL GK   LQYIVFAK
Sbjct: 133 QCNLTGPL-DGLPLSPLHANAFK------EWENWARIQIMSSGSDLFGKTYNLQYIVFAK 185

Query: 304 MLLSKIKDVLWEEEKGTSFMGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 125
           MLL + KD+L+E    TS  G+++ISWWL RVI  QQR+LD+ +SSLFD LQV   E   
Sbjct: 186 MLLMRTKDLLFEGSF-TSINGVRSISWWLARVILFQQRVLDERSSSLFDLLQVFMGETFH 244

Query: 124 HFGKVDNVESYWGTLLDEGEASTIVAMAHLEAGIVEYAYAR 2
           HFG  + V +YWG  L E E S+IV+M HLEAGI+EY Y R
Sbjct: 245 HFGASEKVSNYWGAELHEEELSSIVSMLHLEAGILEYTYGR 285


>emb|CBI27694.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  212 bits (540), Expect = 8e-53
 Identities = 131/281 (46%), Positives = 167/281 (59%), Gaps = 14/281 (4%)
 Frame = -1

Query: 802 FELRLLRCTLXXXXXXXXXXXPQHLIDNLLTSI-------EKGNYQEALNSEAAHLVFHF 644
           +ELRLLRCT              H    LLT+I       E G Y E L+S+A   VF  
Sbjct: 14  YELRLLRCTTATQQQQPPPPQ-SHAATPLLTTIIDTLDLIEAGRYAEVLSSDATRNVFRL 72

Query: 643 AHSYDYQ---NTILSADQFYSQVEYHVQKFLHDNN-NDQERIF---ILLCIAVAAFLAFT 485
              +  Q   +++  AD+FYS++   V  FL D + N+ ER F   +++C+AV+AFL FT
Sbjct: 73  KDEFFSQFSDDSVDCADRFYSELMNRVDSFLVDESVNEVERGFRTVLVMCVAVSAFLGFT 132

Query: 484 QSNITGPCADKVSLFPFPQNNDNGNEIGVAWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 305
           Q N+TGP  D + L P   N          W+ WAR QIMS+GSDL GK   LQYIVFAK
Sbjct: 133 QCNLTGPL-DGLPLSPLHANAFK------EWENWARIQIMSSGSDLFGKTYNLQYIVFAK 185

Query: 304 MLLSKIKDVLWEEEKGTSFMGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 125
           MLL + KD+L+E    TS  G+++ISWWL RVI  QQR+LD+ +SSLFD LQV   E   
Sbjct: 186 MLLMRTKDLLFEGSF-TSINGVRSISWWLARVILFQQRVLDERSSSLFDLLQVFMGETFH 244

Query: 124 HFGKVDNVESYWGTLLDEGEASTIVAMAHLEAGIVEYAYAR 2
           HFG  + V +YWG  L E E S+IV+M HLEAGI+EY Y R
Sbjct: 245 HFGASEKVSNYWGAELHEEELSSIVSMLHLEAGILEYTYGR 285


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