BLASTX nr result

ID: Coptis21_contig00020209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020209
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285311.2| PREDICTED: uncharacterized protein LOC100258...   115   3e-24
emb|CBI20226.3| unnamed protein product [Vitis vinifera]              115   3e-24
emb|CAN71664.1| hypothetical protein VITISV_011991 [Vitis vinifera]   115   3e-24
ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus...   110   9e-23
ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243...   107   1e-21

>ref|XP_002285311.2| PREDICTED: uncharacterized protein LOC100258873 [Vitis vinifera]
          Length = 319

 Score =  115 bits (289), Expect = 3e-24
 Identities = 72/128 (56%), Positives = 83/128 (64%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1   RRSASDSIAFLEAP-FVEECTNNAATLRGGXXXXXXXXXXXXQLMSMFSDDISGSMPQTV 177
           RRS SDSIAFLEAP  VEE  ++ AT+  G            QLMSMFSDDIS ++P TV
Sbjct: 62  RRSVSDSIAFLEAPVLVEEARHSHATMLHGANGFDRLDDD--QLMSMFSDDISLTVPPTV 119

Query: 178 SSSNPSTPSDHNSNNDEKPTPS----DQQQIKNESAEVQSSCNQDAQAQVPAPCTTNGDS 345
           SSS PSTPSD NSNNDEK        DQQ  KNE  EV+SSC  +  +  P+   +NGDS
Sbjct: 120 SSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPGEVESSCKTELPSFRPS-TASNGDS 178

Query: 346 VIDPKRVK 369
           +IDPKRVK
Sbjct: 179 IIDPKRVK 186


>emb|CBI20226.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  115 bits (289), Expect = 3e-24
 Identities = 72/128 (56%), Positives = 83/128 (64%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1   RRSASDSIAFLEAP-FVEECTNNAATLRGGXXXXXXXXXXXXQLMSMFSDDISGSMPQTV 177
           RRS SDSIAFLEAP  VEE  ++ AT+  G            QLMSMFSDDIS ++P TV
Sbjct: 52  RRSVSDSIAFLEAPVLVEEARHSHATMLHGANGFDRLDDD--QLMSMFSDDISLTVPPTV 109

Query: 178 SSSNPSTPSDHNSNNDEKPTPS----DQQQIKNESAEVQSSCNQDAQAQVPAPCTTNGDS 345
           SSS PSTPSD NSNNDEK        DQQ  KNE  EV+SSC  +  +  P+   +NGDS
Sbjct: 110 SSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPGEVESSCKTELPSFRPS-TASNGDS 168

Query: 346 VIDPKRVK 369
           +IDPKRVK
Sbjct: 169 IIDPKRVK 176


>emb|CAN71664.1| hypothetical protein VITISV_011991 [Vitis vinifera]
          Length = 294

 Score =  115 bits (289), Expect = 3e-24
 Identities = 72/128 (56%), Positives = 83/128 (64%), Gaps = 5/128 (3%)
 Frame = +1

Query: 1   RRSASDSIAFLEAP-FVEECTNNAATLRGGXXXXXXXXXXXXQLMSMFSDDISGSMPQTV 177
           RRS SDSIAFLEAP  VEE  ++ AT+  G            QLMSMFSDDIS ++P TV
Sbjct: 37  RRSVSDSIAFLEAPVLVEEARHSHATMLHGANGFDRLDDD--QLMSMFSDDISLTVPPTV 94

Query: 178 SSSNPSTPSDHNSNNDEKPTPS----DQQQIKNESAEVQSSCNQDAQAQVPAPCTTNGDS 345
           SSS PSTPSD NSNNDEK        DQQ  KNE  EV+SSC  +  +  P+   +NGDS
Sbjct: 95  SSSGPSTPSDQNSNNDEKGDEKGAALDQQPPKNEPGEVESSCKTELPSFRPS-TASNGDS 153

Query: 346 VIDPKRVK 369
           +IDPKRVK
Sbjct: 154 IIDPKRVK 161


>ref|XP_002525146.1| Transcription factor RF2a, putative [Ricinus communis]
           gi|223535605|gb|EEF37273.1| Transcription factor RF2a,
           putative [Ricinus communis]
          Length = 325

 Score =  110 bits (276), Expect = 9e-23
 Identities = 71/134 (52%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
 Frame = +1

Query: 1   RRSASDSIAFLEAPFVEECTNNAATLR--------GGXXXXXXXXXXXXQLMSMFSDDIS 156
           RRS SDSIAFLEAP +EEC    A           G             Q MSMF+DDIS
Sbjct: 70  RRSVSDSIAFLEAPLIEECRAIGAPHHHHHHHHGSGHNSSSDFDKFDDEQFMSMFNDDIS 129

Query: 157 GSMPQTVSSSNPSTPSDHNSNNDEK-PTPSDQQQ--IKNESAEVQSSCNQDAQAQVPAPC 327
            ++    S SNPSTPSDHNS NDEK PT SDQ+Q  I+NES EVQS C  D Q    A  
Sbjct: 130 NAVAP--SCSNPSTPSDHNSFNDEKEPTLSDQKQQKIRNESDEVQSQCQTDTQNPSNATN 187

Query: 328 TTNGDSVIDPKRVK 369
           TT+ D +IDPKRVK
Sbjct: 188 TTSSDRIIDPKRVK 201


>ref|XP_002275912.1| PREDICTED: uncharacterized protein LOC100243740 [Vitis vinifera]
           gi|302143381|emb|CBI21942.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score =  107 bits (267), Expect = 1e-21
 Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
 Frame = +1

Query: 1   RRSASDSIAFLEAPFVEECTNNAATLRGGXXXXXXXXXXXXQLMSMFSDDISGSMPQTVS 180
           RRS SDSIAF EAP  ++C N+ A  R              Q MSMF+D    +M  T+S
Sbjct: 55  RRSVSDSIAFFEAP--DDCRNSGAAPRPPGAGNEFDQFDDEQFMSMFTD----AMAPTIS 108

Query: 181 SSNPSTPSDHNSNNDEKPTPSDQQQ----IKNESAEVQSSCNQDAQAQVPAPCTTNGDSV 348
           SSNPSTPSDH S N+EK T  +QQQ    +KNES EVQSSC  ++Q       TT+ D +
Sbjct: 109 SSNPSTPSDHYSFNEEKTTTIEQQQQQQQLKNESEEVQSSCKLESQTPPQPSMTTSNDRI 168

Query: 349 IDPKRVK 369
           +DPKRVK
Sbjct: 169 VDPKRVK 175


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