BLASTX nr result

ID: Coptis21_contig00020208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020208
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG26669.1| homogentisate geranylgeranyl transferase [Foenicu...    77   1e-12
gb|ADG26668.1| homogentisate geranylgeranyl transferase, partial...    76   3e-12
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...    76   3e-12
gb|ADG26671.1| homogentisate geranylgeranyl transferase, partial...    74   1e-11
gb|ADG26670.1| homogentisate geranylgeranyl transferase, partial...    74   1e-11

>gb|ADG26669.1| homogentisate geranylgeranyl transferase [Foeniculum vulgare]
          Length = 186

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/85 (44%), Positives = 49/85 (57%)
 Frame = +1

Query: 7   VAITSSLGIGMALLMGSPPXXXXXXXXXXXXXAYSIDLPFLRWKNNAFLAASCFTFMKAP 186
           VA    + I M ++  SPP             AYSID+P  RWK NAFLAA+C   ++A 
Sbjct: 1   VAAFGLMSIIMGIMFQSPPVLYCLLVCIFFGTAYSIDVPLFRWKKNAFLAATCIVIVRAI 60

Query: 187 AFQFGIFMHIQKYVLKKPIAFTRSL 261
             Q  +F HIQ+YVL +P+ FTRSL
Sbjct: 61  TVQLTVFYHIQQYVLGRPVIFTRSL 85


>gb|ADG26668.1| homogentisate geranylgeranyl transferase, partial [Daucus carota]
          Length = 189

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = +1

Query: 10  AITSSLGIGMALLMG----SPPXXXXXXXXXXXXXAYSIDLPFLRWKNNAFLAASCFTFM 177
           AI S+ G+ M+++MG    SPP             AYSID+P  RWK NAFLAA C   +
Sbjct: 1   AIVSAFGL-MSIIMGIMFQSPPVLYCLLVCFFFGTAYSIDVPLFRWKRNAFLAAMCIVIV 59

Query: 178 KAPAFQFGIFMHIQKYVLKKPIAFTRSL 261
           +A   Q  +F HIQ+YVL +P+ F+RSL
Sbjct: 60  RAITVQLTVFYHIQQYVLGRPVLFSRSL 87


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = +1

Query: 10  AITSSLGIGMALLMG----SPPXXXXXXXXXXXXXAYSIDLPFLRWKNNAFLAASCFTFM 177
           AI S+ G+ M+++MG    SPP             AYSID+P  RWK NAFLAA C   +
Sbjct: 109 AIVSAFGL-MSIIMGIMFQSPPVLYCLLVCFFFGTAYSIDVPLFRWKKNAFLAAMCIVIV 167

Query: 178 KAPAFQFGIFMHIQKYVLKKPIAFTRSL 261
           +A   Q  +F HIQ+YVL +P+ F+RSL
Sbjct: 168 RAITVQLTVFYHIQQYVLGRPVLFSRSL 195


>gb|ADG26671.1| homogentisate geranylgeranyl transferase, partial [Carum carvi]
          Length = 184

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = +1

Query: 10  AITSSLGIGMALLMG----SPPXXXXXXXXXXXXXAYSIDLPFLRWKNNAFLAASCFTFM 177
           AI ++ G+ M+++MG    SPP             AYSID+P  RWK NAFLAA C   +
Sbjct: 1   AIGAAFGL-MSIIMGIMFQSPPVLYCLLVCFFFGTAYSIDVPLFRWKRNAFLAAMCIVIV 59

Query: 178 KAPAFQFGIFMHIQKYVLKKPIAFTRSL 261
           +A   Q  +F HIQ+YVL +P+ F+RSL
Sbjct: 60  RAITVQLTVFYHIQQYVLGRPVLFSRSL 87


>gb|ADG26670.1| homogentisate geranylgeranyl transferase, partial [Anethum
           graveolens]
          Length = 167

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/79 (44%), Positives = 46/79 (58%)
 Frame = +1

Query: 25  LGIGMALLMGSPPXXXXXXXXXXXXXAYSIDLPFLRWKNNAFLAASCFTFMKAPAFQFGI 204
           + I M ++  SPP             AYSID+P  RWK NAFLAA C   ++A   Q  +
Sbjct: 5   MSIIMGIMFQSPPVLYCLLVCFFFGTAYSIDVPLFRWKRNAFLAAMCIVIVRAITVQLTV 64

Query: 205 FMHIQKYVLKKPIAFTRSL 261
           F HIQ+YVL +P+ F+RSL
Sbjct: 65  FYHIQQYVLGRPVLFSRSL 83


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