BLASTX nr result

ID: Coptis21_contig00020196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020196
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...   164   9e-39
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   162   3e-38
dbj|BAD37319.1| putative homogentisic acid geranylgeranyl transf...   160   1e-37
ref|NP_001058202.2| Os06g0646900 [Oryza sativa Japonica Group] g...   160   1e-37

>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/154 (51%), Positives = 104/154 (67%)
 Frame = -1

Query: 464 EIDKVNKPYLPLASGEMSMKTGASIVAITSFLGIGMAMMMRSPPXXXXXXXXXXXXGAYS 285
           EIDKVNKPYLPLASG+ SM TG +IV+ +      M +M +SP               YS
Sbjct: 66  EIDKVNKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVLGSVYS 125

Query: 284 VDLPFLRWKNNAFLAASCFMFMKALTFQIGIFMHIQKYVLKKPIAFTRSLVFATAFMSLF 105
           ++LPFLRWK  AFLAA+C M ++A+  Q+  F+H+QK+VL K    TRSLVFATAFM  F
Sbjct: 126 IELPFLRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGKTTVVTRSLVFATAFMCFF 185

Query: 104 SAALMIIKDIPDVDGDKAFGVKSLAVLMGKETAF 3
           SA + + KDIPDVDGD+ +G++S +V +G+E  F
Sbjct: 186 SAVIALFKDIPDVDGDRDYGIQSFSVSLGQERVF 219


>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/151 (52%), Positives = 106/151 (70%)
 Frame = -1

Query: 464 EIDKVNKPYLPLASGEMSMKTGASIVAITSFLGIGMAMMMRSPPXXXXXXXXXXXXGAYS 285
           EIDKVNKPYLPLASG+ SM TG  IV+ +  L + M +  +SPP              YS
Sbjct: 178 EIDKVNKPYLPLASGKFSMATGILIVSASLLLSLYMGITFQSPPLLAALLISFALGSVYS 237

Query: 284 VDLPFLRWKNNAFLAASCFMFMKALTFQIGIFMHIQKYVLKKPIAFTRSLVFATAFMSLF 105
           ++LPFLRWK +AFLAASC + ++A+  Q+  F+HIQK+VL K I   RSL+FATAFM  F
Sbjct: 238 IELPFLRWKKHAFLAASCILIVRAMVVQLAFFVHIQKFVLGKSIFIPRSLMFATAFMCFF 297

Query: 104 SAALMIIKDIPDVDGDKAFGVKSLAVLMGKE 12
           SAA+ + KDIPDV+GD+ +G++S +V +G+E
Sbjct: 298 SAAIALFKDIPDVEGDRDYGIQSFSVSLGQE 328


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/154 (49%), Positives = 105/154 (68%)
 Frame = -1

Query: 464 EIDKVNKPYLPLASGEMSMKTGASIVAITSFLGIGMAMMMRSPPXXXXXXXXXXXXGAYS 285
           EIDKVNKP LP+ASGE SM+TG +IV+    + I M +M +SPP             AYS
Sbjct: 86  EIDKVNKPNLPIASGEYSMETGKAIVSAFGLMSIIMGIMFQSPPVLYCLLVCFFFGTAYS 145

Query: 284 VDLPFLRWKNNAFLAASCFMFMKALTFQIGIFMHIQKYVLKKPIAFTRSLVFATAFMSLF 105
           +D+P  RWK NAFLAA C + ++A+T Q+ +F HIQ+YVL +P+ F+RSL FA   M+LF
Sbjct: 146 IDVPLFRWKKNAFLAAMCIVIVRAITVQLTVFYHIQQYVLGRPVLFSRSLAFAIICMTLF 205

Query: 104 SAALMIIKDIPDVDGDKAFGVKSLAVLMGKETAF 3
              + + KDIPDVDGD+ FG++++ V +GK+  F
Sbjct: 206 VTVIALFKDIPDVDGDRDFGIQTITVTLGKKRVF 239


>dbj|BAD37319.1| putative homogentisic acid geranylgeranyl transferase [Oryza sativa
           Japonica Group] gi|51535642|dbj|BAD37616.1| putative
           homogentisic acid geranylgeranyl transferase [Oryza
           sativa Japonica Group]
          Length = 270

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/154 (50%), Positives = 106/154 (68%)
 Frame = -1

Query: 464 EIDKVNKPYLPLASGEMSMKTGASIVAITSFLGIGMAMMMRSPPXXXXXXXXXXXXGAYS 285
           +IDKVNKP LPLASGE S+ TGA +V  +  + I + +  +S P             AYS
Sbjct: 39  QIDKVNKPSLPLASGEFSVATGAVLVLTSLIMSIAIGIRSKSAPLLCALFISFFLGSAYS 98

Query: 284 VDLPFLRWKNNAFLAASCFMFMKALTFQIGIFMHIQKYVLKKPIAFTRSLVFATAFMSLF 105
           VD P LRWK NAFLAASC +F++A+  Q+  F H+Q++VLK+P+A T+S+VFAT FM  F
Sbjct: 99  VDAPLLRWKRNAFLAASCILFVRAVLVQLAFFAHMQQHVLKRPLAPTKSVVFATLFMCCF 158

Query: 104 SAALMIIKDIPDVDGDKAFGVKSLAVLMGKETAF 3
           S+ + + KDIPD+DGD+ FGV+SL+V +G E  +
Sbjct: 159 SSVIALFKDIPDIDGDRHFGVESLSVRLGPERVY 192


>ref|NP_001058202.2| Os06g0646900 [Oryza sativa Japonica Group]
           gi|255677275|dbj|BAF20116.2| Os06g0646900, partial
           [Oryza sativa Japonica Group]
          Length = 278

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/154 (50%), Positives = 106/154 (68%)
 Frame = -1

Query: 464 EIDKVNKPYLPLASGEMSMKTGASIVAITSFLGIGMAMMMRSPPXXXXXXXXXXXXGAYS 285
           +IDKVNKP LPLASGE S+ TGA +V  +  + I + +  +S P             AYS
Sbjct: 47  QIDKVNKPSLPLASGEFSVATGAVLVLTSLIMSIAIGIRSKSAPLLCALFISFFLGSAYS 106

Query: 284 VDLPFLRWKNNAFLAASCFMFMKALTFQIGIFMHIQKYVLKKPIAFTRSLVFATAFMSLF 105
           VD P LRWK NAFLAASC +F++A+  Q+  F H+Q++VLK+P+A T+S+VFAT FM  F
Sbjct: 107 VDAPLLRWKRNAFLAASCILFVRAVLVQLAFFAHMQQHVLKRPLAPTKSVVFATLFMCCF 166

Query: 104 SAALMIIKDIPDVDGDKAFGVKSLAVLMGKETAF 3
           S+ + + KDIPD+DGD+ FGV+SL+V +G E  +
Sbjct: 167 SSVIALFKDIPDIDGDRHFGVESLSVRLGPERVY 200


Top