BLASTX nr result

ID: Coptis21_contig00020182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020182
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22959.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_002272681.1| PREDICTED: uncharacterized protein LOC100244...    78   8e-13
gb|ACJ83881.1| unknown [Medicago truncatula]                           77   1e-12
ref|XP_003550411.1| PREDICTED: uncharacterized protein LOC100810...    73   2e-11
emb|CAN69222.1| hypothetical protein VITISV_012018 [Vitis vinifera]    72   4e-11

>emb|CBI22959.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = -2

Query: 338 NYDGYGGSEWE-----FSDPAFDFVYEVICWIVMSNCLHFALKKICRILFAADGEFVDSA 174
           N+D +GG  W+      SDPAFDFVYEVICWI +SNC+HFA K++ RI FA D    D++
Sbjct: 121 NFDRFGGHNWDESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRI-FADD--IGDAS 177

Query: 173 REKGPLRLVSI 141
           REK P R  S+
Sbjct: 178 REKVPFRFASM 188


>ref|XP_002272681.1| PREDICTED: uncharacterized protein LOC100244847 [Vitis vinifera]
          Length = 226

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
 Frame = -2

Query: 338 NYDGYGGSEWE-----FSDPAFDFVYEVICWIVMSNCLHFALKKICRILFAADGEFVDSA 174
           N+D +GG  W+      SDPAFDFVYEVICWI +SNC+HFA K++ RI FA D    D++
Sbjct: 158 NFDRFGGHNWDESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRI-FADD--IGDAS 214

Query: 173 REKGPLRLVSI 141
           REK P R  S+
Sbjct: 215 REKVPFRFASM 225


>gb|ACJ83881.1| unknown [Medicago truncatula]
          Length = 179

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 16/79 (20%)
 Frame = -2

Query: 329 GYGGSEWEFS----------------DPAFDFVYEVICWIVMSNCLHFALKKICRILFAA 198
           G GG +W F+                DPAFDFVY V+ WI++SNCLHFA+KKI RI+  A
Sbjct: 102 GGGGGDWNFNRFGEGENWDEHSSSLQDPAFDFVYRVLSWIMLSNCLHFAVKKIVRII--A 159

Query: 197 DGEFVDSAREKGPLRLVSI 141
           DG  VDS REK P RL  I
Sbjct: 160 DGSIVDSDREKVPARLAPI 178


>ref|XP_003550411.1| PREDICTED: uncharacterized protein LOC100810316 [Glycine max]
          Length = 185

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
 Frame = -2

Query: 323 GGSEWE-----FSDPAFDFVYEVICWIVMSNCLHFALKKICRILFAADGEFVDSAREKGP 159
           GG+ W+       DPAFDFVY+V+ WI++SNCLHF+ K+I RI+  A G  VDS REK P
Sbjct: 121 GGNNWDEPSSSVPDPAFDFVYQVLSWIMLSNCLHFSFKRIVRIV--AAGSIVDSDREKVP 178

Query: 158 LRLVSI 141
            RLV I
Sbjct: 179 ARLVPI 184


>emb|CAN69222.1| hypothetical protein VITISV_012018 [Vitis vinifera]
          Length = 347

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
 Frame = -2

Query: 338 NYDGYGGSEWE-----FSDPAFDFVYEVICWIVMSNCLHFALKKICRILFAADGEFVDSA 174
           N+D +GG  W+      SDPAFDFVYEVICWI +SNC+HFA K++ RI FA D    D++
Sbjct: 158 NFDRFGGHNWDESPSSSSDPAFDFVYEVICWIALSNCVHFAFKRVVRI-FADD--IGDAS 214

Query: 173 REK 165
           REK
Sbjct: 215 REK 217


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