BLASTX nr result

ID: Coptis21_contig00020179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020179
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...   260   1e-67
ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-66
emb|CBI20791.3| unnamed protein product [Vitis vinifera]              252   2e-65
ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242...   252   2e-65
ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775...   247   7e-64

>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 965

 Score =  260 bits (664), Expect = 1e-67
 Identities = 136/182 (74%), Positives = 155/182 (85%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 ISSSMKHALAKMFLASAEGDYVALLSAFAEMGLKLRLDLPEQAMMVTNGFFRASTPASEA 364
           ISSS+K ALAKMFLAS EGD+VALLSAFAEMGLKLRLDLPEQAM VTN FFR STPA+EA
Sbjct: 316 ISSSIKQALAKMFLASVEGDHVALLSAFAEMGLKLRLDLPEQAMEVTNVFFRTSTPANEA 375

Query: 363 LENMKSLTEERTKNIKFIQEKLNMSKKEVSRFNPVDAFPGDAVIFVRVLTLLQGLSSTLN 184
            ENMKSL E+R+KN+K IQEK+ +S+KEV RFNPVDAFPGD VIF RVL LL+GLSST+N
Sbjct: 376 FENMKSLAEQRSKNMKVIQEKMKLSQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMN 435

Query: 183 VRVIYLDIMRPFAESILQRNISKVTASNEQWI-STPVHSNVEAKLRELLTELGGVDRILG 7
           VR+IY +IMRPFAE  LQ NI+K    N QWI +TPVHS+VE KLR+LL ELG  D+ILG
Sbjct: 436 VRIIYQEIMRPFAEFALQGNINKGPTVNAQWIHNTPVHSDVETKLRQLLIELGNEDKILG 495

Query: 6   VQ 1
           +Q
Sbjct: 496 IQ 497


>ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|222872618|gb|EEF09749.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score =  256 bits (655), Expect = 1e-66
 Identities = 130/182 (71%), Positives = 157/182 (86%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 ISSSMKHALAKMFLASAEGDYVALLSAFAEMGLKLRLDLPEQAMMVTNGFFRASTPASEA 364
           ISSSMK +LAKMFLA+AEGD+VALLS+FAEMGLKLRLDLPEQAM VT+ FFRASTPA+EA
Sbjct: 314 ISSSMKQSLAKMFLATAEGDHVALLSSFAEMGLKLRLDLPEQAMDVTSIFFRASTPANEA 373

Query: 363 LENMKSLTEERTKNIKFIQEKLNMSKKEVSRFNPVDAFPGDAVIFVRVLTLLQGLSSTLN 184
            E  K+L E+RT+N+K +QEK+N+S+KEV RFNP+DAFPGD VIF RV+ LL+GLSSTLN
Sbjct: 374 AEYAKTLNEQRTRNMKVLQEKMNLSQKEVKRFNPIDAFPGDMVIFSRVVNLLRGLSSTLN 433

Query: 183 VRVIYLDIMRPFAESILQRNISKVTASNEQWI-STPVHSNVEAKLRELLTELGGVDRILG 7
            R++Y DIMRPFAES+LQ  I+K  ++N QWI  TPVHS VEAKLR++L ELG  D+ILG
Sbjct: 434 ARIVYQDIMRPFAESVLQEKIAKGPSANAQWIYDTPVHSEVEAKLRQILVELGNEDKILG 493

Query: 6   VQ 1
           +Q
Sbjct: 494 IQ 495


>emb|CBI20791.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  252 bits (644), Expect = 2e-65
 Identities = 130/182 (71%), Positives = 155/182 (85%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 ISSSMKHALAKMFLASAEGDYVALLSAFAEMGLKLRLDLPEQAMMVTNGFFRASTPASEA 364
           +SSSMK ALAK+FLASAEGD+VALLSA +EMGL+LRLDLP+QAM V   FFR+STPASEA
Sbjct: 315 LSSSMKQALAKLFLASAEGDHVALLSALSEMGLRLRLDLPDQAMEVATVFFRSSTPASEA 374

Query: 363 LENMKSLTEERTKNIKFIQEKLNMSKKEVSRFNPVDAFPGDAVIFVRVLTLLQGLSSTLN 184
           LENM+SL+++RTKN+K IQEK+ ++KKEV RFNPVDAFPGD VIF RVL LL+GLS+ ++
Sbjct: 375 LENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVDAFPGDIVIFARVLNLLRGLSTIMD 434

Query: 183 VRVIYLDIMRPFAESILQRNISKVTASNEQWI-STPVHSNVEAKLRELLTELGGVDRILG 7
           VR+ YLDIMRPFAES+LQ  I+K  A N QWI  TPVHS+VE KLR LL ELG  D+ILG
Sbjct: 435 VRISYLDIMRPFAESVLQGYINKGPAVNSQWIYDTPVHSDVETKLRRLLVELGNDDKILG 494

Query: 6   VQ 1
           +Q
Sbjct: 495 IQ 496


>ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera]
          Length = 978

 Score =  252 bits (644), Expect = 2e-65
 Identities = 130/182 (71%), Positives = 155/182 (85%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 ISSSMKHALAKMFLASAEGDYVALLSAFAEMGLKLRLDLPEQAMMVTNGFFRASTPASEA 364
           +SSSMK ALAK+FLASAEGD+VALLSA +EMGL+LRLDLP+QAM V   FFR+STPASEA
Sbjct: 315 LSSSMKQALAKLFLASAEGDHVALLSALSEMGLRLRLDLPDQAMEVATVFFRSSTPASEA 374

Query: 363 LENMKSLTEERTKNIKFIQEKLNMSKKEVSRFNPVDAFPGDAVIFVRVLTLLQGLSSTLN 184
           LENM+SL+++RTKN+K IQEK+ ++KKEV RFNPVDAFPGD VIF RVL LL+GLS+ ++
Sbjct: 375 LENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVDAFPGDIVIFARVLNLLRGLSTIMD 434

Query: 183 VRVIYLDIMRPFAESILQRNISKVTASNEQWI-STPVHSNVEAKLRELLTELGGVDRILG 7
           VR+ YLDIMRPFAES+LQ  I+K  A N QWI  TPVHS+VE KLR LL ELG  D+ILG
Sbjct: 435 VRISYLDIMRPFAESVLQGYINKGPAVNSQWIYDTPVHSDVETKLRRLLVELGNDDKILG 494

Query: 6   VQ 1
           +Q
Sbjct: 495 IQ 496


>ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775929 isoform 2 [Glycine
           max]
          Length = 994

 Score =  247 bits (631), Expect = 7e-64
 Identities = 125/182 (68%), Positives = 156/182 (85%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 ISSSMKHALAKMFLASAEGDYVALLSAFAEMGLKLRLDLPEQAMMVTNGFFRASTPASEA 364
           +SS++K ALAKMFLASAEGD+VALLSAFAEMGLKLRLD+PEQAM VT  FFRA+TPA+E 
Sbjct: 344 LSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQAMEVTTVFFRATTPANEY 403

Query: 363 LENMKSLTEERTKNIKFIQEKLNMSKKEVSRFNPVDAFPGDAVIFVRVLTLLQGLSSTLN 184
            + MKSL ++R +N+K IQEK+N+ KKE+ RFNPVDAFPGD VIF RVL LL+GLSST+N
Sbjct: 404 HKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVDAFPGDIVIFGRVLNLLRGLSSTMN 463

Query: 183 VRVIYLDIMRPFAESILQRNISKVTASNEQWI-STPVHSNVEAKLRELLTELGGVDRILG 7
           VR++Y+DIMRPFAES+L   ISK  + N++WI  +PVHS+VE+KLR+LL E+G  D+ILG
Sbjct: 464 VRIVYMDIMRPFAESVLSGYISKGPSLNDRWIFDSPVHSDVESKLRQLLIEMGNNDKILG 523

Query: 6   VQ 1
           +Q
Sbjct: 524 IQ 525


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