BLASTX nr result

ID: Coptis21_contig00020166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020166
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...   117   1e-24
ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus co...   115   3e-24
dbj|BAD81036.1| potassium channel TORK1 [Nicotiana tabacum]           114   8e-24
gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera ph...   111   5e-23

>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -2

Query: 423 KKCTVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEVE 244
           KKCT+FPFHPW  KE+R+ GVVLW+PHT EEL+K A+E L  PDGSCILSEDAG+ILEV+
Sbjct: 752 KKCTIFPFHPWGAKEQRRPGVVLWIPHTMEELVKAASEKLQLPDGSCILSEDAGKILEVD 811

Query: 243 MIYDGQKLYL 214
           MI DGQKLYL
Sbjct: 812 MIDDGQKLYL 821


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/75 (68%), Positives = 61/75 (81%)
 Frame = -2

Query: 438 DDTQRKKCTVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 259
           D    KKCTVFPFHPWDPK+ R+ G+VLW+PH+ EELIK+AAE +    GSCILSEDAG+
Sbjct: 770 DKMHPKKCTVFPFHPWDPKDNRRHGIVLWIPHSIEELIKSAAEQIEISGGSCILSEDAGK 829

Query: 258 ILEVEMIYDGQKLYL 214
           I +V+MI DGQKLYL
Sbjct: 830 ITDVDMIKDGQKLYL 844


>ref|XP_002533481.1| Potassium channel SKOR, putative [Ricinus communis]
           gi|223526674|gb|EEF28913.1| Potassium channel SKOR,
           putative [Ricinus communis]
          Length = 445

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/78 (65%), Positives = 64/78 (82%)
 Frame = -2

Query: 438 DDTQRKKCTVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 259
           D  QR+KCT+FPFHPWDPKE+++ G+VLWVP T EELIK AAE LN PD S +LS+D G+
Sbjct: 364 DKIQRRKCTIFPFHPWDPKEQKRPGIVLWVPQTMEELIKAAAEQLNLPDDSFMLSKDGGK 423

Query: 258 ILEVEMIYDGQKLYLDSK 205
           IL+V+M+ DGQ LYL S+
Sbjct: 424 ILDVDMVDDGQMLYLISE 441


>dbj|BAD81036.1| potassium channel TORK1 [Nicotiana tabacum]
          Length = 827

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/73 (69%), Positives = 62/73 (84%)
 Frame = -2

Query: 423 KKCTVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGEILEVE 244
           +KCTVFPFHPW+PK+ RK GVVLW+P + EELI TA+E LN P GSCILSEDAG+IL++ 
Sbjct: 753 QKCTVFPFHPWEPKDLRKHGVVLWIPKSMEELITTASEQLNFPSGSCILSEDAGKILDIG 812

Query: 243 MIYDGQKLYLDSK 205
           +I DGQKLYL S+
Sbjct: 813 LISDGQKLYLISE 825


>gb|AFO70199.1| potassium channel SKOR, partial [Alternanthera philoxeroides]
          Length = 849

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/78 (66%), Positives = 60/78 (76%)
 Frame = -2

Query: 438  DDTQRKKCTVFPFHPWDPKEKRKQGVVLWVPHTTEELIKTAAENLNCPDGSCILSEDAGE 259
            D    KKCTVFPFHPW PKE RK G+VLW PH  +ELIK A+E LN P GS ILSED G+
Sbjct: 770  DKKLHKKCTVFPFHPWGPKENRKPGIVLWTPHRIDELIKMASEKLNFPRGSSILSEDGGK 829

Query: 258  ILEVEMIYDGQKLYLDSK 205
            IL+V+MI +GQKLYL S+
Sbjct: 830  ILDVDMIDNGQKLYLISE 847


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