BLASTX nr result

ID: Coptis21_contig00020164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020164
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40316.1| unknown [Lotus japonicus]                               60   1e-07
gb|AFK37258.1| unknown [Lotus japonicus]                               60   1e-07
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s...    60   1e-07
ref|XP_003551365.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    60   1e-07
ref|XP_003551373.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    60   2e-07

>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -1

Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1
           MKIL+ NAGALTNFEVLDFLR +GAS DPTRVIA
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIA 34


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -1

Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1
           MKIL+ NAGALTNFEVLDFLR +GAS DPTRVIA
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIA 34


>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Glycine max]
          Length = 161

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -1

Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1
           MKIL+ NAGALTNFEVLDFLR++GAS DPTRVIA
Sbjct: 1   MKILECNAGALTNFEVLDFLRAKGASKDPTRVIA 34


>ref|XP_003551365.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit RPC9-like [Glycine max]
          Length = 103

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -1

Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1
           MKIL+ NAGALTNFEVLDFLR++GAS DPTRVIA
Sbjct: 1   MKILERNAGALTNFEVLDFLRAKGASKDPTRVIA 34


>ref|XP_003551373.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit RPC9-like [Glycine max]
          Length = 103

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -1

Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1
           MKIL+ NAGALTNFEVLDFLR++GAS DPTRVIA
Sbjct: 1   MKILEGNAGALTNFEVLDFLRAKGASKDPTRVIA 34


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