BLASTX nr result
ID: Coptis21_contig00020164
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00020164 (249 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK40316.1| unknown [Lotus japonicus] 60 1e-07 gb|AFK37258.1| unknown [Lotus japonicus] 60 1e-07 ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s... 60 1e-07 ref|XP_003551365.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 60 1e-07 ref|XP_003551373.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 60 2e-07 >gb|AFK40316.1| unknown [Lotus japonicus] Length = 162 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -1 Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1 MKIL+ NAGALTNFEVLDFLR +GAS DPTRVIA Sbjct: 1 MKILEANAGALTNFEVLDFLRGKGASKDPTRVIA 34 >gb|AFK37258.1| unknown [Lotus japonicus] Length = 162 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -1 Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1 MKIL+ NAGALTNFEVLDFLR +GAS DPTRVIA Sbjct: 1 MKILEANAGALTNFEVLDFLRGKGASKDPTRVIA 34 >ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like [Glycine max] Length = 161 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1 MKIL+ NAGALTNFEVLDFLR++GAS DPTRVIA Sbjct: 1 MKILECNAGALTNFEVLDFLRAKGASKDPTRVIA 34 >ref|XP_003551365.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC9-like [Glycine max] Length = 103 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1 MKIL+ NAGALTNFEVLDFLR++GAS DPTRVIA Sbjct: 1 MKILERNAGALTNFEVLDFLRAKGASKDPTRVIA 34 >ref|XP_003551373.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC9-like [Glycine max] Length = 103 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 102 MKILQTNAGALTNFEVLDFLRSRGASTDPTRVIA 1 MKIL+ NAGALTNFEVLDFLR++GAS DPTRVIA Sbjct: 1 MKILEGNAGALTNFEVLDFLRAKGASKDPTRVIA 34