BLASTX nr result
ID: Coptis21_contig00020162
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00020162 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003526798.1| PREDICTED: transmembrane protein 184C-like [... 156 1e-36 ref|XP_003604097.1| Transmembrane protein 184C [Medicago truncat... 155 2e-36 ref|XP_003524039.1| PREDICTED: transmembrane protein 184C-like [... 154 5e-36 gb|AFK39029.1| unknown [Lotus japonicus] 150 1e-34 ref|XP_002312807.1| predicted protein [Populus trichocarpa] gi|2... 146 1e-33 >ref|XP_003526798.1| PREDICTED: transmembrane protein 184C-like [Glycine max] Length = 492 Score = 156 bits (395), Expect = 1e-36 Identities = 74/90 (82%), Positives = 80/90 (88%) Frame = -3 Query: 271 MAVACIVHLYVFPAKPYELLGDRFTGNFSVLGDYSADCPLDPDEIRDSERPTKIRLPQPD 92 M +A IVHLYVFPAKPYE +GDRF+G+ SVLGDYSADCPLDPDEIRDSERPTK+RLP PD Sbjct: 292 MGIASIVHLYVFPAKPYERMGDRFSGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPTPD 351 Query: 91 VDIKSRMKIRESVKDVVFGSGGYIVKDVKF 2 VD KS M IRESV+DVV G GGYIVKDVKF Sbjct: 352 VDTKSGMTIRESVRDVVIGGGGYIVKDVKF 381 >ref|XP_003604097.1| Transmembrane protein 184C [Medicago truncatula] gi|355493145|gb|AES74348.1| Transmembrane protein 184C [Medicago truncatula] Length = 480 Score = 155 bits (393), Expect = 2e-36 Identities = 74/90 (82%), Positives = 79/90 (87%) Frame = -3 Query: 271 MAVACIVHLYVFPAKPYELLGDRFTGNFSVLGDYSADCPLDPDEIRDSERPTKIRLPQPD 92 M +A IVHLYVFPAKPYEL+GDR G+ SVLGDYSADCPLDPDEIRDSERPTK+RLP PD Sbjct: 280 MGIASIVHLYVFPAKPYELMGDRLPGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPAPD 339 Query: 91 VDIKSRMKIRESVKDVVFGSGGYIVKDVKF 2 VD KS M IRESV+DVV G GGYIVKDVKF Sbjct: 340 VDAKSGMTIRESVRDVVIGGGGYIVKDVKF 369 >ref|XP_003524039.1| PREDICTED: transmembrane protein 184C-like [Glycine max] Length = 486 Score = 154 bits (390), Expect = 5e-36 Identities = 74/90 (82%), Positives = 79/90 (87%) Frame = -3 Query: 271 MAVACIVHLYVFPAKPYELLGDRFTGNFSVLGDYSADCPLDPDEIRDSERPTKIRLPQPD 92 M +A IVHLYVFPAKPYE +GDRF+G+ SVLGDYSADCPLDPDEIRDSERPTK+RLP PD Sbjct: 286 MGIASIVHLYVFPAKPYERMGDRFSGSVSVLGDYSADCPLDPDEIRDSERPTKLRLPTPD 345 Query: 91 VDIKSRMKIRESVKDVVFGSGGYIVKDVKF 2 VD KS M IRESV DVV G GGYIVKDVKF Sbjct: 346 VDTKSGMTIRESVCDVVIGGGGYIVKDVKF 375 >gb|AFK39029.1| unknown [Lotus japonicus] Length = 201 Score = 150 bits (379), Expect = 1e-34 Identities = 72/90 (80%), Positives = 77/90 (85%) Frame = -3 Query: 271 MAVACIVHLYVFPAKPYELLGDRFTGNFSVLGDYSADCPLDPDEIRDSERPTKIRLPQPD 92 M +A IVHLYVFPAKPYEL+GDR G+ SVLGDYSADCPLDPDEIRDSERPTK+RLP D Sbjct: 1 MGIASIVHLYVFPAKPYELMGDRHPGSISVLGDYSADCPLDPDEIRDSERPTKLRLPTTD 60 Query: 91 VDIKSRMKIRESVKDVVFGSGGYIVKDVKF 2 VD KS M IRESV+DVV G GYIVKDVKF Sbjct: 61 VDAKSGMTIRESVRDVVIGGSGYIVKDVKF 90 >ref|XP_002312807.1| predicted protein [Populus trichocarpa] gi|222849215|gb|EEE86762.1| predicted protein [Populus trichocarpa] Length = 488 Score = 146 bits (369), Expect = 1e-33 Identities = 67/91 (73%), Positives = 80/91 (87%), Gaps = 1/91 (1%) Frame = -3 Query: 271 MAVACIVHLYVFPAKPYELLGDRFTGNFSVLGDY-SADCPLDPDEIRDSERPTKIRLPQP 95 M +A IVHLYVFPAKPYEL+GDRF G+ +VLGDY S DCP+DPDE+RDSERPTK+RLPQP Sbjct: 286 MGIASIVHLYVFPAKPYELMGDRFPGSVAVLGDYVSVDCPVDPDEVRDSERPTKLRLPQP 345 Query: 94 DVDIKSRMKIRESVKDVVFGSGGYIVKDVKF 2 D+D++S M I+ESV+DVV G GG+IV DVKF Sbjct: 346 DIDVRSGMTIKESVRDVVVGGGGFIVNDVKF 376