BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020156
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620...    61   7e-12
ref|NP_565951.1| Nup93/Nic96 nucleoporin interacting component-c...    60   1e-11
ref|XP_002881785.1| nucleoporin interacting component family pro...    60   1e-11
ref|NP_191294.5| nuclear pore complex component Nup93/Nic96 doma...    56   1e-10
emb|CAB68141.1| putative protein [Arabidopsis thaliana]                56   2e-10

>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
           gi|449494745|ref|XP_004159635.1| PREDICTED:
           uncharacterized protein At2g41620-like [Cucumis sativus]
          Length = 863

 Score = 60.8 bits (146), Expect(2) = 7e-12
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 368 LQIRLRDYGVLDFDASDARRQPPLDTTWQLV 460
           L+IRLRDYGVLDFDA+DARRQPP+DTTWQ +
Sbjct: 321 LRIRLRDYGVLDFDANDARRQPPVDTTWQQI 351



 Score = 34.7 bits (78), Expect(2) = 7e-12
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +1

Query: 187 QAAFGGAVGNLQRVRAFPRV 246
           QAA GG VGNLQR+RAF R+
Sbjct: 304 QAALGGVVGNLQRIRAFLRI 323


>ref|NP_565951.1| Nup93/Nic96 nucleoporin interacting component-containing protein
           [Arabidopsis thaliana]
           gi|21542465|sp|O22224.2|Y2162_ARATH RecName:
           Full=Uncharacterized protein At2g41620
           gi|14334432|gb|AAK59414.1| unknown protein [Arabidopsis
           thaliana] gi|20196948|gb|AAB84345.2| expressed protein
           [Arabidopsis thaliana] gi|21281026|gb|AAM44953.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254914|gb|AEC10008.1| Nup93/Nic96 nucleoporin
           interacting component-containing protein [Arabidopsis
           thaliana]
          Length = 861

 Score = 59.7 bits (143), Expect(2) = 1e-11
 Identities = 25/31 (80%), Positives = 30/31 (96%)
 Frame = +2

Query: 368 LQIRLRDYGVLDFDASDARRQPPLDTTWQLV 460
           L+IRLRDYGVLDFD++DARRQPP+DTTWQ +
Sbjct: 319 LRIRLRDYGVLDFDSTDARRQPPVDTTWQQI 349



 Score = 35.0 bits (79), Expect(2) = 1e-11
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 187 QAAFGGAVGNLQRVRAFPRV 246
           QAA GG+VGNLQR+RAF R+
Sbjct: 302 QAALGGSVGNLQRIRAFLRI 321


>ref|XP_002881785.1| nucleoporin interacting component family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297327624|gb|EFH58044.1|
           nucleoporin interacting component family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 855

 Score = 59.7 bits (143), Expect(2) = 1e-11
 Identities = 25/31 (80%), Positives = 30/31 (96%)
 Frame = +2

Query: 368 LQIRLRDYGVLDFDASDARRQPPLDTTWQLV 460
           L+IRLRDYGVLDFD++DARRQPP+DTTWQ +
Sbjct: 313 LRIRLRDYGVLDFDSTDARRQPPVDTTWQQI 343



 Score = 35.0 bits (79), Expect(2) = 1e-11
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 187 QAAFGGAVGNLQRVRAFPRV 246
           QAA GG+VGNLQR+RAF R+
Sbjct: 296 QAALGGSVGNLQRIRAFLRI 315


>ref|NP_191294.5| nuclear pore complex component Nup93/Nic96 domain-containing
           protein [Arabidopsis thaliana]
           gi|332646124|gb|AEE79645.1| nuclear pore complex
           component Nup93/Nic96 domain-containing protein
           [Arabidopsis thaliana]
          Length = 860

 Score = 56.2 bits (134), Expect(2) = 1e-10
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 368 LQIRLRDYGVLDFDASDARRQPPLDTTWQLV 460
           L+IRLRDYG LDFD+ DARRQPP+DTTWQ +
Sbjct: 317 LRIRLRDYGSLDFDSVDARRQPPVDTTWQQI 347



 Score = 35.0 bits (79), Expect(2) = 1e-10
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 187 QAAFGGAVGNLQRVRAFPRV 246
           QAA GG+VGNLQR+RAF R+
Sbjct: 300 QAALGGSVGNLQRIRAFLRI 319


>emb|CAB68141.1| putative protein [Arabidopsis thaliana]
          Length = 875

 Score = 55.8 bits (133), Expect(2) = 2e-10
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 368 LQIRLRDYGVLDFDASDARRQPPLDTTWQ 454
           L+IRLRDYG LDFD+ DARRQPP+DTTWQ
Sbjct: 330 LRIRLRDYGSLDFDSVDARRQPPVDTTWQ 358



 Score = 35.0 bits (79), Expect(2) = 2e-10
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 187 QAAFGGAVGNLQRVRAFPRV 246
           QAA GG+VGNLQR+RAF R+
Sbjct: 313 QAALGGSVGNLQRIRAFLRI 332