BLASTX nr result
ID: Coptis21_contig00020138
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00020138 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFN50993.1| histone H3 [Chlorella variabilis] 39 8e-08 ref|XP_003796851.1| PREDICTED: histone H3.3-like [Otolemur garne... 37 1e-07 ref|XP_001964816.1| GF22233 [Drosophila ananassae] gi|190617426|... 39 2e-07 gb|ADX77785.1| histone H3 [Cyphastrea serailia] 38 4e-07 gb|EHB11500.1| Histone H3 [Heterocephalus glaber] 39 5e-07 >gb|EFN50993.1| histone H3 [Chlorella variabilis] Length = 127 Score = 38.5 bits (88), Expect(3) = 8e-08 Identities = 20/23 (86%), Positives = 21/23 (91%) Frame = -3 Query: 376 TKQTTRKSSTGGKAPRKQLATEA 308 TKQT RKS TGGKAPRKQLAT+A Sbjct: 4 TKQTARKS-TGGKAPRKQLATKA 25 Score = 31.2 bits (69), Expect(3) = 8e-08 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = -1 Query: 213 LIRKLLF*RLVHDCEIAQDFETDLK 139 LIRKL F RLV EIAQDF+TDL+ Sbjct: 53 LIRKLPFQRLVR--EIAQDFKTDLR 75 Score = 30.8 bits (68), Expect(3) = 8e-08 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = -2 Query: 293 RHQQNEK*RPGTVAFCKIRKYHKSIKL 213 R Q+ + RPGTVA +IRKY KS +L Sbjct: 26 RPQKPHRYRPGTVALREIRKYQKSTEL 52 >ref|XP_003796851.1| PREDICTED: histone H3.3-like [Otolemur garnettii] Length = 136 Score = 37.0 bits (84), Expect(3) = 1e-07 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = -3 Query: 376 TKQTTRKSSTGGKAPRKQLATEA 308 TKQT RKS TGGKAPR+QLAT+A Sbjct: 4 TKQTARKS-TGGKAPRQQLATKA 25 Score = 34.3 bits (77), Expect(3) = 1e-07 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -2 Query: 332 KEATCNRGRRKLNRHQQNEK*RPGTVAFCKIRKYHKSIKL 213 K C RG +K R+ RPGTVA +IR+Y KS +L Sbjct: 28 KSTPCTRGMKKPRRY------RPGTVALRQIRRYQKSTEL 61 Score = 28.5 bits (62), Expect(3) = 1e-07 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = -1 Query: 213 LIRKLLF*RLVHDCEIAQDFETDLK 139 LI KL F RLV EIAQDF+TDL+ Sbjct: 62 LIGKLPFQRLVR--EIAQDFKTDLR 84 >ref|XP_001964816.1| GF22233 [Drosophila ananassae] gi|190617426|gb|EDV32950.1| GF22233 [Drosophila ananassae] Length = 151 Score = 38.5 bits (88), Expect(3) = 2e-07 Identities = 20/23 (86%), Positives = 21/23 (91%) Frame = -3 Query: 376 TKQTTRKSSTGGKAPRKQLATEA 308 TKQT RKS TGGKAPRKQLAT+A Sbjct: 4 TKQTARKS-TGGKAPRKQLATKA 25 Score = 31.2 bits (69), Expect(3) = 2e-07 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = -1 Query: 213 LIRKLLF*RLVHDCEIAQDFETDLK 139 LIRKL F RLV EIAQDF+TDL+ Sbjct: 77 LIRKLPFQRLVR--EIAQDFKTDLR 99 Score = 29.6 bits (65), Expect(3) = 2e-07 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -2 Query: 320 CNRGRRKLNRHQQNEK*RPGTVAFCKIRKYHKSIKL 213 C G +K +R+ RPGTVA +IR+Y KS +L Sbjct: 47 CTGGVKKPHRY------RPGTVALREIRRYQKSTEL 76 >gb|ADX77785.1| histone H3 [Cyphastrea serailia] Length = 119 Score = 37.7 bits (86), Expect(3) = 4e-07 Identities = 20/23 (86%), Positives = 20/23 (86%) Frame = -3 Query: 376 TKQTTRKSSTGGKAPRKQLATEA 308 TKQT RKS TGGKAPRKQLAT A Sbjct: 4 TKQTARKS-TGGKAPRKQLATTA 25 Score = 31.2 bits (69), Expect(3) = 4e-07 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = -1 Query: 213 LIRKLLF*RLVHDCEIAQDFETDLK 139 LIRKL F RLV EIAQDF+TDL+ Sbjct: 62 LIRKLPFQRLVR--EIAQDFKTDLR 84 Score = 29.3 bits (64), Expect(3) = 4e-07 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -2 Query: 332 KEATCNRGRRKLNRHQQNEK*RPGTVAFCKIRKYHKSIKL 213 K A G +K +R+ RPGTVA +IR+Y KS +L Sbjct: 28 KSAPATGGVKKPHRY------RPGTVALREIRRYQKSTEL 61 >gb|EHB11500.1| Histone H3 [Heterocephalus glaber] Length = 143 Score = 38.9 bits (89), Expect(3) = 5e-07 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -3 Query: 376 TKQTTRKSSTGGKAPRKQLATEAEEN 299 TKQT RKS TGGKAPRKQLAT+A ++ Sbjct: 4 TKQTARKS-TGGKAPRKQLATKAAKS 28 Score = 31.2 bits (69), Expect(3) = 5e-07 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = -1 Query: 213 LIRKLLF*RLVHDCEIAQDFETDLK 139 LIRKL F RLV EIAQDF+TDL+ Sbjct: 69 LIRKLPFQRLVR--EIAQDFKTDLR 91 Score = 27.7 bits (60), Expect(3) = 5e-07 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 Query: 269 RPGTVAFCKIRKYHKSIKL 213 RPGTVA +IR+Y KS +L Sbjct: 50 RPGTVALREIRRYQKSTEL 68