BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020131
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   358   e-115
emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]   343   e-109
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 343   e-109
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 347   e-108
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              340   e-105

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  358 bits (918), Expect(2) = e-115
 Identities = 175/281 (62%), Positives = 214/281 (76%), Gaps = 4/281 (1%)
 Frame = +1

Query: 55   FLAEAKEVGTFFAIAPSLVVD----PTEVPSVLQPILAQYADICREPDGGGLPPYRDIQH 222
            F  E+KE    FA+    V +      E P+  + IL  ++D+        LPP RDIQH
Sbjct: 554  FENESKETXVIFALMARKVEEFKEQDKEYPANARKILDDFSDLWPVELPNELPPMRDIQH 613

Query: 223  SIDFIPGASLPNLPHYRMTPTEHAELQRQVIELCQKGLLRASKSPCAVPALLTPKKDGSW 402
            +ID IPGASLPNLP YRM PTEHAEL+RQV EL  KG +R S SPC VPALLTPKKDGSW
Sbjct: 614  AIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPALLTPKKDGSW 673

Query: 403  RMCVDSRAINKITIKYRFPIPRVEDMLDSLQGARVFTKFDLKSGYYQVRM*VGDEWKTAF 582
            RMCVDSRAINKITIKYRFPIPR++DMLD + G+ +F+K DL+SGY+Q+R+  GDEWKT+F
Sbjct: 674  RMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSF 733

Query: 583  KTKDGLYEWLVMPFGLSNAPSTFMRLMTDILRPYLGKFVVVYFDDILIYSNTEAAHLQHV 762
            KTKDGLYEWLVMPFGL+NAPSTFMR+MT +L+P++G+FVVVYFDDILIYS +   H +H+
Sbjct: 734  KTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCEDHEEHL 793

Query: 763  ETILEVLRQNKLYL*LKKCSFMVPSVNFLGYVVSGDGIRVD 885
            + ++  LR  K Y+ LKKC+FM PSV FLG+VVS  G+  D
Sbjct: 794  KQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETD 834



 Score = 84.0 bits (206), Expect(2) = e-115
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +2

Query: 890  KIQAIIDWPIPSSVSHVRSFHGLASFYRRFINGFSAIMAPITALLKDKVFVWTDEAESA 1066
            KI+AI+DWP+P+++  VRSFHG+A+FYRRFI  FS+IMAPIT  +K  +F+WT  A  A
Sbjct: 837  KIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKA 895


>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
          Length = 1499

 Score =  343 bits (879), Expect(2) = e-109
 Identities = 161/230 (70%), Positives = 191/230 (83%)
 Frame = +1

Query: 196  LPPYRDIQHSIDFIPGASLPNLPHYRMTPTEHAELQRQVIELCQKGLLRASKSPCAVPAL 375
            LPP RD+QH+ID IPGASLPNLP YRM PTEHAEL+RQV EL  KG +R S SPC VPAL
Sbjct: 538  LPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPAL 597

Query: 376  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRVEDMLDSLQGARVFTKFDLKSGYYQVRM* 555
            LTPKKDGSWRMCVDSRAINKITIKYRFPIPR++DMLD + G+ +F+K DL+SGY+Q+ + 
Sbjct: 598  LTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQICIR 657

Query: 556  VGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTDILRPYLGKFVVVYFDDILIYSN 735
             GDEWKT+FKTKDGLYEWLVMPFGL+NAPSTFMR MT +L+P++G FVVVYFDDILIYS 
Sbjct: 658  SGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRSMTQVLKPFIGWFVVVYFDDILIYSR 717

Query: 736  TEAAHLQHVETILEVLRQNKLYL*LKKCSFMVPSVNFLGYVVSGDGIRVD 885
            +   H +H++ ++  LR  K Y+ LKKC+FM PSV FLG+VVS  G+  D
Sbjct: 718  SCEDHEEHLKQVMRTLRAKKFYINLKKCTFMSPSVVFLGFVVSSKGVETD 767



 Score = 80.5 bits (197), Expect(2) = e-109
 Identities = 34/59 (57%), Positives = 46/59 (77%)
 Frame = +2

Query: 890  KIQAIIDWPIPSSVSHVRSFHGLASFYRRFINGFSAIMAPITALLKDKVFVWTDEAESA 1066
            KI+AI+DWP+P+++  VRSFHG+A+FYRRFI  FS+IMAPI   +K  +F+WT  A  A
Sbjct: 770  KIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPIIEGMKPGLFIWTKAANKA 828


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  343 bits (881), Expect(2) = e-109
 Identities = 176/312 (56%), Positives = 217/312 (69%), Gaps = 17/312 (5%)
 Frame = +1

Query: 1    LILEPLPPPAARKTVSATFLAEAKEV----------------GTFFAIAPSLVVDPT-EV 129
            +IL PLPP   + T   + L  +KEV                  +  IA  +V      +
Sbjct: 505  VILTPLPP-VLKHTTPPSMLEPSKEVLLINEAEMLQELKGDEDVYALIAKDVVFGQNVSL 563

Query: 130  PSVLQPILAQYADICREPDGGGLPPYRDIQHSIDFIPGASLPNLPHYRMTPTEHAELQRQ 309
            P  +Q +L  Y D+       GLPP R I+H IDFIPGA+LPN   YR  P    ELQ+Q
Sbjct: 564  PKEVQELLQSYEDVFPNELPSGLPPLRGIEHQIDFIPGATLPNKAAYRSDPKATQELQQQ 623

Query: 310  VIELCQKGLLRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRVEDMLDS 489
            + EL  KG +R S SPC+VPALL PKKDGSWRMC DSRAIN ITIKYRFPIPR++D+LD 
Sbjct: 624  IGELVSKGFVRESLSPCSVPALLVPKKDGSWRMCTDSRAINNITIKYRFPIPRLDDILDE 683

Query: 490  LQGARVFTKFDLKSGYYQVRM*VGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTD 669
            L GA++F+K DL+ GY+QVR+  GDEWKTAFKTK GLYEWLVMPFGLSNAPSTFMRLMT+
Sbjct: 684  LSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTE 743

Query: 670  ILRPYLGKFVVVYFDDILIYSNTEAAHLQHVETILEVLRQNKLYL*LKKCSFMVPSVNFL 849
            +LRPYLG+FVVVYFDDIL+YS ++  HL+H++ + E LR++KLY  L+KCSFM   V FL
Sbjct: 744  VLRPYLGRFVVVYFDDILVYSPSKEEHLKHLQVLFETLREHKLYGKLEKCSFMQNEVQFL 803

Query: 850  GYVVSGDGIRVD 885
            G+++S  GI VD
Sbjct: 804  GFIISDRGILVD 815



 Score = 79.7 bits (195), Expect(2) = e-109
 Identities = 36/59 (61%), Positives = 45/59 (76%)
 Frame = +2

Query: 890  KIQAIIDWPIPSSVSHVRSFHGLASFYRRFINGFSAIMAPITALLKDKVFVWTDEAESA 1066
            K++AI  WPIP +++ VRSFHGLASFYRRFI  FS +MAPIT  +K   F W D+AES+
Sbjct: 818  KVKAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECMKKGEFKWGDKAESS 876


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  347 bits (891), Expect(2) = e-108
 Identities = 174/309 (56%), Positives = 218/309 (70%), Gaps = 16/309 (5%)
 Frame = +1

Query: 7    LEPLPP-------PAARKTVSAT-FLAEAKEVGTFFAIAPSLVV--------DPTEVPSV 138
            L PLPP       P   + +S   FL+EA  +       P L++        + T VP+ 
Sbjct: 519  LTPLPPNQRDYGSPNVPEEMSGVLFLSEAAMIKEIRQAQPVLMLLSREVNQEENTVVPTA 578

Query: 139  LQPILAQYADICREPDGGGLPPYRDIQHSIDFIPGASLPNLPHYRMTPTEHAELQRQVIE 318
            + P++ ++ ++  +    GLPP R I+H ID +PG+ LPN P YR  P    ELQ Q+ E
Sbjct: 579  VAPLIQRFQEVFPDELPSGLPPLRGIEHHIDLVPGSVLPNKPAYRCDPNATKELQHQIEE 638

Query: 319  LCQKGLLRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRVEDMLDSLQG 498
            L  KG +R S SPCAVPALL PKKDG+WRMC DSRAIN IT+KYRFPIPR++DMLD L G
Sbjct: 639  LMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAINNITVKYRFPIPRLDDMLDELSG 698

Query: 499  ARVFTKFDLKSGYYQVRM*VGDEWKTAFKTKDGLYEWLVMPFGLSNAPSTFMRLMTDILR 678
            A +F+K DL+ GY+QVR+  GDEWKTAFKTK GLYEWLVMPFGLSNAPSTFMRLMT++LR
Sbjct: 699  ASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLR 758

Query: 679  PYLGKFVVVYFDDILIYSNTEAAHLQHVETILEVLRQNKLYL*LKKCSFMVPSVNFLGYV 858
            P LGKF VVYFDDIL+YS T+  HL+H+E + ++LR+ KLY  L+KC+FMV  V FLGY+
Sbjct: 759  PCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFKILREQKLYGKLEKCTFMVEEVAFLGYL 818

Query: 859  VSGDGIRVD 885
            +SG GI VD
Sbjct: 819  ISGRGISVD 827



 Score = 72.4 bits (176), Expect(2) = e-108
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +2

Query: 893  IQAIIDWPIPSSVSHVRSFHGLASFYRRFINGFSAIMAPITALLKDKVFVWTDEAESA 1066
            I A+  WP P++V+ VRSFHGLASFYRRFI  FS ++APIT  ++   F WT++A+ +
Sbjct: 831  IAAMQSWPTPTTVTEVRSFHGLASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQS 888


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  340 bits (873), Expect(2) = e-105
 Identities = 160/262 (61%), Positives = 202/262 (77%)
 Frame = +1

Query: 103  SLVVDPTEVPSVLQPILAQYADICREPDGGGLPPYRDIQHSIDFIPGASLPNLPHYRMTP 282
            SL      +PS ++ +L  Y D+  E +  GLPP R I+H IDF+PGASLPN P YR  P
Sbjct: 861  SLTNPEQAIPSKIKFLLQDYTDVFPEENPVGLPPIRGIEHQIDFVPGASLPNRPAYRTNP 920

Query: 283  TEHAELQRQVIELCQKGLLRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITIKYRFPI 462
             E  EL++QV EL ++G +R S SPCAVP LL PKKDGSWRMCVD RAIN IT+KYR PI
Sbjct: 921  VETKELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPI 980

Query: 463  PRVEDMLDSLQGARVFTKFDLKSGYYQVRM*VGDEWKTAFKTKDGLYEWLVMPFGLSNAP 642
            PR++DMLD L G+ +F+K DLKSGY+Q+RM  GDEWKTAFKT  GLYEWLVMPFGL+NAP
Sbjct: 981  PRLDDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAP 1040

Query: 643  STFMRLMTDILRPYLGKFVVVYFDDILIYSNTEAAHLQHVETILEVLRQNKLYL*LKKCS 822
            STFMRLM  +LR ++G+FV+VYFDDIL+YS +   H++H++ +LEVLR+ KLY  LKKC+
Sbjct: 1041 STFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCT 1100

Query: 823  FMVPSVNFLGYVVSGDGIRVDD 888
            F   ++ FLG+VVS DG++VD+
Sbjct: 1101 FGTDNLVFLGFVVSTDGVKVDE 1122



 Score = 68.9 bits (167), Expect(2) = e-105
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 890  KIQAIIDWPIPSSVSHVRSFHGLASFYRRFINGFSAIMAPITALLKDKV-FVWTDEAESA 1066
            K++AI +WP P SV  VRSFHGLA FYRRF+  FS + AP+T ++K  V F W    E A
Sbjct: 1124 KVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDA 1183