BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020121
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    63   4e-08
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08
ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncat...    59   6e-07

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
 Frame = +1

Query: 205 ILDNIFPRIPLKSLSQCRWVCKTWYNLILHPRFAQIHYHFSIQNHSSPCLILCDFGNSSL 384
           +L  IF R+P+K L +CR +CKTWY+LI +  F   H  ++I ++++  LIL  +  S+ 
Sbjct: 9   VLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSNK 68

Query: 385 RLIDGQTFDNLQTCQVEQVLLKHRLPND-----LELIGYANGLICITEDHSRNYRSTYFL 549
           +      FD+       Q L     P +      E++G  NG+IC+T++HS +      L
Sbjct: 69  KERFALHFDDDDMFSEYQEL---DFPLESSWDYFEIVGSCNGIICLTDNHS-HILKRIVL 124

Query: 550 YNPITG 567
           +NP  G
Sbjct: 125 WNPSIG 130


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
 Frame = +1

Query: 190 LPTNIILDNIFPRIPLKSLSQCRWVCKTWYNLILHPRFAQIHYHFSIQNHSSPCLILCDF 369
           LP  I +D I  R+P+++++QC+ VCK+W +L+  P FA++  HF+    SS  L+ C  
Sbjct: 24  LPAEIFVD-ILSRLPVEAMTQCKSVCKSWRDLLSTPYFARL--HFAKAKPSS--LLFCHC 78

Query: 370 GNSSLRL----IDGQTFDNLQTCQVEQVLLKHRLPNDL---ELIGYANGLICITEDHSRN 528
             +  +L    I      N+    V  +  K +LP +    +++G +NGL+C++E H   
Sbjct: 79  SGNKTKLYCCHIHSSRGSNINNAMV-SMPTKFKLPKNTFRGKVVGSSNGLLCLSEIH--R 135

Query: 529 YRSTYFLYNPITGDH 573
            +  +++ NPITG++
Sbjct: 136 MKKKFYICNPITGEY 150


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
 Frame = +1

Query: 190 LPTNIILDNIFPRIPLKSLSQCRWVCKTWYNLILHPRFAQIHYHFSIQNHSSPCLIL-CD 366
           LP  I  D I  R+P+ SL Q + VC+ W  L+  P+   ++   S Q+   PCLIL CD
Sbjct: 28  LPREIAHD-ILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCD 86

Query: 367 FG-NSSLRLIDGQTFDNLQTCQVEQVLLKHRLPNDLELIGYANGLICITEDHSRNYRSTY 543
           F   ++L  +D    +  +            +  + E++G  NGL+C+++     Y  + 
Sbjct: 87  FPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLSDS---LYNDSL 143

Query: 544 FLYNPITG 567
           ++YNP TG
Sbjct: 144 YIYNPFTG 151


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
 Frame = +1

Query: 184 SKLPTNIILDNIFPRIPLKSLSQCRWVCKTWYNLILHPRFAQIHYHFS---IQNHSSPCL 354
           S LP +I  D I  ++PLKS  QCR VC+TW NL+    F+++    +   +   S P  
Sbjct: 26  SALPDDITAD-ILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQSMLVLRSPPSC 84

Query: 355 I-------------LCDFGNSSLR--LIDGQTFDNLQTCQVEQVLLKHRLPNDLELIGYA 489
           +             + D  + S+R  ++   T +NL TC V             EL+G  
Sbjct: 85  VSRKAAALAPNDFYVVDLESGSVRNNVMKLNTKNNLPTCHV-------------ELVGSC 131

Query: 490 NGLICITEDHSRNYRSTYFLYNPITGDH 573
           NGL+C+ +   +N +  ++L NP+TG+H
Sbjct: 132 NGLLCLFD---KNSKKVFYLCNPVTGEH 156


>ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516029|gb|AES97652.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 396

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
 Frame = +1

Query: 205 ILDNIFPRIPLKSLSQCRWVCKTWYNLILHPRFAQIHYHFSIQNHSSPCL--ILCDFGNS 378
           ++  I  R+P+K L Q R VCK W +LI  P+FA+ H+ F     S+ CL  IL     S
Sbjct: 50  LIPEILHRLPVKPLMQFRCVCKWWNSLISDPKFAKKHFLF-----STTCLIHILAYSSLS 104

Query: 379 SLRLIDGQTFDNLQTCQVE-QVLLKHRLPNDLEL--IGYANGLICITEDHSRNYRSTYFL 549
              +I     D+L T  V    + +H + ++  +  +G  NG+IC+ E H       Y L
Sbjct: 105 HKYIIKSYPLDSLFTKDVACNKIAQHEIASNHSIYNVGSCNGIICVAEYHIYERFVIYRL 164

Query: 550 YNP 558
           +NP
Sbjct: 165 WNP 167