BLASTX nr result

ID: Coptis21_contig00020120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020120
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521046.1| PREDICTED: uncharacterized protein LOC100306...    89   5e-16
gb|AFK38818.1| unknown [Medicago truncatula]                           84   1e-14
ref|XP_002272715.1| PREDICTED: uncharacterized protein LOC100267...    84   1e-14
emb|CBI40349.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|NP_191962.2| uncharacterized protein [Arabidopsis thaliana] ...    81   1e-13

>ref|XP_003521046.1| PREDICTED: uncharacterized protein LOC100306571 [Glycine max]
           gi|255628915|gb|ACU14802.1| unknown [Glycine max]
          Length = 79

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/75 (58%), Positives = 56/75 (74%)
 Frame = +2

Query: 17  MDLKTQKLVRITTIVSTLTVSYFLLTADYGPEPNILDPIKKKIESAESSVKKFVFGYDKE 196
           M  +T+KLVR  T V+T+  SYFLLTADYGP+PN LDPIKK+I SA+S+VK+++ G  KE
Sbjct: 4   MSPRTEKLVRRLTFVTTVAASYFLLTADYGPKPNALDPIKKQILSAQSTVKEYIVGSKKE 63

Query: 197 SQESESGKTK*NTTN 241
           SQES  G+   N  N
Sbjct: 64  SQESHVGRLDSNKDN 78


>gb|AFK38818.1| unknown [Medicago truncatula]
          Length = 79

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = +2

Query: 17  MDLKTQKLVRITTIVSTLTVSYFLLTADYGPEPNILDPIKKKIESAESSVKKFVFGYDKE 196
           M+ KT K V+  TIV+T+T SYF LTADYGP+PN LDPIKK++ SA+S+VK+F  G   E
Sbjct: 4   MNPKTDKFVKRLTIVATITASYFFLTADYGPKPNALDPIKKQLLSAQSTVKEFFLGSKSE 63

Query: 197 SQESESGKTK*N 232
           S+E   GK+  N
Sbjct: 64  SEEKHIGKSDSN 75


>ref|XP_002272715.1| PREDICTED: uncharacterized protein LOC100267043 [Vitis vinifera]
          Length = 80

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/61 (67%), Positives = 49/61 (80%)
 Frame = +2

Query: 17  MDLKTQKLVRITTIVSTLTVSYFLLTADYGPEPNILDPIKKKIESAESSVKKFVFGYDKE 196
           M+ +T KLVR TT+V+T T SYFLLTADYG EPN LDPIK  I SAE SVK+F+FG +K+
Sbjct: 17  MNPRTDKLVRRTTMVATATASYFLLTADYGAEPNALDPIKNAIHSAERSVKEFIFGSEKD 76

Query: 197 S 199
           S
Sbjct: 77  S 77


>emb|CBI40349.3| unnamed protein product [Vitis vinifera]
          Length = 64

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/61 (67%), Positives = 49/61 (80%)
 Frame = +2

Query: 17  MDLKTQKLVRITTIVSTLTVSYFLLTADYGPEPNILDPIKKKIESAESSVKKFVFGYDKE 196
           M+ +T KLVR TT+V+T T SYFLLTADYG EPN LDPIK  I SAE SVK+F+FG +K+
Sbjct: 1   MNPRTDKLVRRTTMVATATASYFLLTADYGAEPNALDPIKNAIHSAERSVKEFIFGSEKD 60

Query: 197 S 199
           S
Sbjct: 61  S 61


>ref|NP_191962.2| uncharacterized protein [Arabidopsis thaliana]
           gi|49617787|gb|AAT67589.1| hypothetical protein
           At4G00530 [Arabidopsis thaliana]
           gi|60547841|gb|AAX23884.1| hypothetical protein
           At4g00530 [Arabidopsis thaliana]
           gi|332656495|gb|AEE81895.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 71

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = +2

Query: 17  MDLKTQKLVRITTIVSTLTVSYFLLTADYGPEPNILDPIKKKIESAESSVKKFVFGYDKE 196
           M+ +T K+VR TT+V+T   SYFLLT DYGPEPN+LDPIK+KI +A+ SVK+F+FG   E
Sbjct: 1   MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60

Query: 197 SQESESGKT 223
               E   T
Sbjct: 61  PSGKEPSDT 69


Top