BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020117
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31086.3| unnamed protein product [Vitis vinifera]              151   5e-35
ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003630936.1| Pentatricopeptide repeat-containing protein ...   138   4e-31
ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31

>emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/101 (68%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   KHIFELDPQNSGYYMLLANVHGDAGQWESVTKVRNLMKTRRVQKIPGCSWIEINSSTHMF 182
           +++F+LDPQNSGYY+LL+NVH +AGQWESV K+R+LMK R VQK+PGCSWI++N++THMF
Sbjct: 645 RNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMF 704

Query: 183 VADDKSHPQSLEIYFLLTSLFLELRKEGYAPQ-PTTIHSQT 302
           VA D+SHPQS +IY LL +LFLELRKEGY PQ    +H QT
Sbjct: 705 VAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQT 745


>ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Vitis vinifera]
          Length = 853

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/101 (68%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    KHIFELDPQNSGYYMLLANVHGDAGQWESVTKVRNLMKTRRVQKIPGCSWIEINSSTHMF 182
            +++F+LDPQNSGYY+LL+NVH +AGQWESV K+R+LMK R VQK+PGCSWI++N++THMF
Sbjct: 744  RNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMF 803

Query: 183  VADDKSHPQSLEIYFLLTSLFLELRKEGYAPQ-PTTIHSQT 302
            VA D+SHPQS +IY LL +LFLELRKEGY PQ    +H QT
Sbjct: 804  VAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQT 844


>ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/93 (66%), Positives = 77/93 (82%)
 Frame = +3

Query: 3   KHIFELDPQNSGYYMLLANVHGDAGQWESVTKVRNLMKTRRVQKIPGCSWIEINSSTHMF 182
           +H+ ELDP+NSGYY+LL+NVH DAG+W SV KVR+LMK + VQKIPG SWI++N  THMF
Sbjct: 709 RHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMF 768

Query: 183 VADDKSHPQSLEIYFLLTSLFLELRKEGYAPQP 281
            A D +HP+S+EIY +L SL LELRK+GY PQP
Sbjct: 769 SAADGNHPESVEIYLILKSLLLELRKQGYVPQP 801


>ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524958|gb|AET05412.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/93 (67%), Positives = 74/93 (79%)
 Frame = +3

Query: 3    KHIFELDPQNSGYYMLLANVHGDAGQWESVTKVRNLMKTRRVQKIPGCSWIEINSSTHMF 182
            KH+ ELDP NSGYY+LL+NVH  AG+WESV KVR+LMK + VQKIPG SWI++N  THMF
Sbjct: 774  KHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMF 833

Query: 183  VADDKSHPQSLEIYFLLTSLFLELRKEGYAPQP 281
             A D  HPQS+EIY +L +L LELRK GY PQP
Sbjct: 834  SAADGCHPQSVEIYLILKNLLLELRKHGYVPQP 866


>ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Glycine max]
          Length = 846

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/93 (65%), Positives = 76/93 (81%)
 Frame = +3

Query: 3    KHIFELDPQNSGYYMLLANVHGDAGQWESVTKVRNLMKTRRVQKIPGCSWIEINSSTHMF 182
            +H+ ELDP+NSGYY+LL+NVH DAG+W SV KVR LMK + VQKIPG SWI++N  THMF
Sbjct: 742  RHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMF 801

Query: 183  VADDKSHPQSLEIYFLLTSLFLELRKEGYAPQP 281
             A + +HP+S+EIY +L SL LELRK+GY PQP
Sbjct: 802  SAAEGNHPESVEIYLILNSLLLELRKQGYVPQP 834