BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020113
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-...   525   e-146
ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   523   e-146
ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|...   523   e-146
ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   473   e-131
ref|XP_003529944.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   441   e-121

>ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera]
            gi|297745280|emb|CBI40360.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  525 bits (1351), Expect = e-146
 Identities = 243/354 (68%), Positives = 288/354 (81%)
 Frame = +2

Query: 32   LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWRELVCSEEWYSYRRK 211
            LE + ++E   +PLI GLPDDIAL CLARVPR+YHTLLKCVSRRWR+LV SEEW++YR+K
Sbjct: 8    LEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQK 67

Query: 212  HNLEETWIYALCRDRIRINQICCYVLDPNSSKRCWRRIRDIPSQCTKRKGMSFEALGNKI 391
            H L+E WIYALCRD+    ++CCYVLDP S++R W+ I   P +  KRKGMSFE LG K+
Sbjct: 68   HKLDEPWIYALCRDKFE--RVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKV 125

Query: 392  YLLGGCGWFQDATDEVYCYDTSKNSWDKAAAMSTARCYFACEALNEKIYAIGGVGSNSSD 571
            YLLGGCGW +DATDEVY YD S N W +AA +STARCYFACE LN KIYAIGG+GS S+D
Sbjct: 126  YLLGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSND 185

Query: 572  PLSWDTYDPRTNSWTSYSDLNVVPDIEESVVMDGKIYIRCGASYTIPPHVYSVVYEPSNG 751
            P SWDTY+P TNSW S+ D N+VPDIE+S+V+D KIYIRCG S  +  HVY+VVY PS+G
Sbjct: 186  PHSWDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYIRCGTS-GLTSHVYAVVYNPSHG 244

Query: 752  TWQHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPC 931
            TWQHAD DMV GW+GP++VV+  LYVLD+  GTRLMMWQKES+ WVA+GRLSPLLT PPC
Sbjct: 245  TWQHADADMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQKESRKWVAVGRLSPLLTCPPC 304

Query: 932  RLAVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDEVISCKTIS 1093
            RL  +G  I VIGKGLSTVV D+G   NMGGV+VSSSIPKL SDD+VISCK ++
Sbjct: 305  RLVAIGKSIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIPKLTSDDDVISCKILA 358


>ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP4-like
            [Vitis vinifera]
          Length = 359

 Score =  523 bits (1347), Expect = e-146
 Identities = 242/354 (68%), Positives = 288/354 (81%)
 Frame = +2

Query: 32   LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWRELVCSEEWYSYRRK 211
            LE + ++E   +PLI GLPDDIAL CLARVPR+YHTLLKCVSRRWR+LV SEEW++YR+K
Sbjct: 8    LEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQK 67

Query: 212  HNLEETWIYALCRDRIRINQICCYVLDPNSSKRCWRRIRDIPSQCTKRKGMSFEALGNKI 391
            H L+E WIYALCRD+ +  ++CCYVLDP S++R W+ I   P +  KRKGMSFE LG K+
Sbjct: 68   HKLDEPWIYALCRDKFK--RVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKV 125

Query: 392  YLLGGCGWFQDATDEVYCYDTSKNSWDKAAAMSTARCYFACEALNEKIYAIGGVGSNSSD 571
            YLLGGCGW +DATDEVY YD S N W +AA +STARCYFACE LN KIYAIGG+GS S+D
Sbjct: 126  YLLGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSND 185

Query: 572  PLSWDTYDPRTNSWTSYSDLNVVPDIEESVVMDGKIYIRCGASYTIPPHVYSVVYEPSNG 751
            P SWDTY+P TNSW S+SD N+VPDIE+++V+D KIYIRCG S  +  HVY VVY PS+G
Sbjct: 186  PHSWDTYNPHTNSWKSHSDPNIVPDIEDTIVLDEKIYIRCGTS-ALTSHVYVVVYNPSHG 244

Query: 752  TWQHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPC 931
            TWQHAD DMV GW+GP++VV+   +VLD+  GTRLMMWQKES  WVA+GRLSPLLT PPC
Sbjct: 245  TWQHADADMVLGWQGPAVVVDGXFFVLDQRLGTRLMMWQKESTKWVAVGRLSPLLTCPPC 304

Query: 932  RLAVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDEVISCKTIS 1093
            RL  +G  I VIGKGLSTVV D+G A NMGGV+VSSSIPKL SDD+VISCK ++
Sbjct: 305  RLVAIGKSIFVIGKGLSTVVFDIGNAGNMGGVMVSSSIPKLTSDDDVISCKILA 358


>ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|223549030|gb|EEF50519.1|
            Protein AFR, putative [Ricinus communis]
          Length = 353

 Score =  523 bits (1347), Expect = e-146
 Identities = 234/348 (67%), Positives = 288/348 (82%)
 Frame = +2

Query: 50   LEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWRELVCSEEWYSYRRKHNLEET 229
            +E     LI GLPDDI LFCLARVPR+YHT+LKCV RRWR+LVCSEEW +YR KHNL ET
Sbjct: 8    IEEGQAQLIRGLPDDIVLFCLARVPRKYHTVLKCVCRRWRDLVCSEEWRAYRMKHNLSET 67

Query: 230  WIYALCRDRIRINQICCYVLDPNSSKRCWRRIRDIPSQCTKRKGMSFEALGNKIYLLGGC 409
            WIYALCRD+   +QICCYVLDP+SS+RCW+ I+ +PS C KRKGM FEALG K+Y LGGC
Sbjct: 68   WIYALCRDKF--DQICCYVLDPDSSRRCWKLIQGLPSHCLKRKGMGFEALGKKLYFLGGC 125

Query: 410  GWFQDATDEVYCYDTSKNSWDKAAAMSTARCYFACEALNEKIYAIGGVGSNSSDPLSWDT 589
            GW +DATDE YCYD S+NSW +A ++STARCYFACE ++ KIYAIGG+GS  SDP SWDT
Sbjct: 126  GWLEDATDEAYCYDVSRNSWTEATSLSTARCYFACEVMDGKIYAIGGLGSKLSDPHSWDT 185

Query: 590  YDPRTNSWTSYSDLNVVPDIEESVVMDGKIYIRCGASYTIPPHVYSVVYEPSNGTWQHAD 769
            +D   N W S+SD N+VPD+E+S+V+DGKIYIRCGAS ++  HVY+V+YEP NGTWQHAD
Sbjct: 186  FDAHKNCWESHSDANIVPDVEDSIVLDGKIYIRCGAS-SVSSHVYAVLYEPLNGTWQHAD 244

Query: 770  NDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRLAVVG 949
             DM SGWRGP++VV   LYVLD++SGTRLM+W+K+ ++W+A+GRLS LLTRPPCR+  +G
Sbjct: 245  VDMASGWRGPAVVVXXCLYVLDQSSGTRLMIWRKDKREWMAVGRLSSLLTRPPCRIVAIG 304

Query: 950  NCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDEVISCKTIS 1093
              I +IGKGLSTVV D+G+  NM GV+VSSSIP L  +D+VISCK+++
Sbjct: 305  KRIFIIGKGLSTVVFDIGKTGNMEGVMVSSSIPGLNYEDDVISCKSLA 352


>ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score =  473 bits (1218), Expect = e-131
 Identities = 216/352 (61%), Positives = 275/352 (78%)
 Frame = +2

Query: 38   TMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWRELVCSEEWYSYRRKHN 217
            ++ ++E  ++ LI GLPDD++L CLARVPR+YH++LKCVS+RWR+L+CSEEWY YRRKH 
Sbjct: 13   SVNEIEATNSLLICGLPDDLSLMCLARVPRKYHSVLKCVSKRWRDLICSEEWYHYRRKHK 72

Query: 218  LEETWIYALCRDRIRINQICCYVLDPNSSKRCWRRIRDIPSQCTKRKGMSFEALGNKIYL 397
            L+ETWIYALCRD+   N+I CYVLDP +S+R W+ +  +P   + RKGM FEALGNK++L
Sbjct: 73   LDETWIYALCRDKS--NEIFCYVLDPTTSRRYWKLLDGLPPHISNRKGMGFEALGNKLFL 130

Query: 398  LGGCGWFQDATDEVYCYDTSKNSWDKAAAMSTARCYFACEALNEKIYAIGGVGSNSSDPL 577
            LGGC  F D+TDE Y YD S N W +AA++S ARCYFACE L+EK+YAIGG+ SNSSD  
Sbjct: 131  LGGCSGFLDSTDEAYSYDASSNCWVEAASLSNARCYFACEVLDEKLYAIGGLVSNSSDN- 189

Query: 578  SWDTYDPRTNSWTSYSDLNVVPDIEESVVMDGKIYIRCGASYTIPPHVYSVVYEPSNGTW 757
            SWDT+DP T  WT + D N+  DIE+SVV+DGKIY RC     + PH ++VVYEPS+GTW
Sbjct: 190  SWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAPHAFAVVYEPSSGTW 249

Query: 758  QHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRL 937
            Q+AD DMVSGW GP++VV   LYVLD++ GTRLMMW KE ++W+ +G+LSPLLTRPPC+L
Sbjct: 250  QYADADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPVGKLSPLLTRPPCQL 309

Query: 938  AVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDEVISCKTIS 1093
              VG  I ++GK LSTVV+DVG+  N G V++ SSIP L SD  VISCK +S
Sbjct: 310  VAVGKSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVISCKCLS 361


>ref|XP_003529944.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 361

 Score =  441 bits (1135), Expect = e-121
 Identities = 202/352 (57%), Positives = 272/352 (77%)
 Frame = +2

Query: 38   TMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWRELVCSEEWYSYRRKHN 217
            ++ ++E  ++P+I GLPDDI+L CLAR+PR+YH+++KCVS+RWR L+CSEEW+ YRRKH 
Sbjct: 13   SINEVEVTNSPIICGLPDDISLMCLARIPRKYHSVMKCVSKRWRNLICSEEWFCYRRKHK 72

Query: 218  LEETWIYALCRDRIRINQICCYVLDPNSSKRCWRRIRDIPSQCTKRKGMSFEALGNKIYL 397
            L+ETWIYALCRD+   N+I CYVLDP  S+R W+ I ++P Q +KRKG+ FEALGNK++L
Sbjct: 73   LDETWIYALCRDKS--NEIFCYVLDPTLSRRYWKLIDNLPPQISKRKGIGFEALGNKLFL 130

Query: 398  LGGCGWFQDATDEVYCYDTSKNSWDKAAAMSTARCYFACEALNEKIYAIGGVGSNSSDPL 577
            LGGC  F D+TDEVY YD S N W +A ++STAR  F CE L++K+YAIGG GS SS   
Sbjct: 131  LGGCSEFLDSTDEVYSYDASSNCWAQATSLSTARYNFGCEVLDKKLYAIGGGGSKSSYH- 189

Query: 578  SWDTYDPRTNSWTSYSDLNVVPDIEESVVMDGKIYIRCGASYTIPPHVYSVVYEPSNGTW 757
            SW+T+DP TN WTS +D  +V +I++SVV+DGKIY+RC + Y + PHV++VVYEPS+GTW
Sbjct: 190  SWETFDPLTNCWTSQTDPKIVNEIKDSVVLDGKIYVRC-SRYPVTPHVFAVVYEPSSGTW 248

Query: 758  QHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRL 937
            ++AD+DMVSGW GP++ V+  LYVLD+++GT+LMMW KE ++W+ +G+LSPL  R PC+L
Sbjct: 249  EYADDDMVSGWTGPAVAVDGTLYVLDQSAGTKLMMWHKERREWILVGKLSPLPIRQPCQL 308

Query: 938  AVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDEVISCKTIS 1093
              VG  I V+G+ LSTVV+DV    N   V+V S+IP L  D  V S K +S
Sbjct: 309  VAVGKSIFVVGRVLSTVVVDVDNLGNEDQVIVGSAIPGLLFDVNVTSVKCLS 360