BLASTX nr result

ID: Coptis21_contig00020102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020102
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29042.3| unnamed protein product [Vitis vinifera]              215   4e-54
ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261...   213   1e-53
ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780...   209   3e-52
ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805...   208   6e-52
ref|XP_003592704.1| Lysine-specific demethylase 3B [Medicago tru...   203   2e-50

>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  215 bits (548), Expect = 4e-54
 Identities = 103/182 (56%), Positives = 128/182 (70%), Gaps = 8/182 (4%)
 Frame = -3

Query: 523 EGVTRKKPATKEDYGD-STMCHQCQRNDKGPVVRCTKCKSKRYCHKCLN-WYPHLSHTEV 350
           +GV  KK   K+   + S MCHQCQRNDKG VVRC KCK KR+C  CL  WYPH+S   +
Sbjct: 306 DGVAVKKRGKKKWIEEVSLMCHQCQRNDKGRVVRCRKCKRKRFCIPCLETWYPHMSEEAI 365

Query: 349 AESCPVCRGNCNCKQCLRSNKEKTKM------ERKLSKKEKVNYSKYXXXXXXXXLKQID 188
           AESCP C GNCNCK CLR +    KM      + KLS +EK  +S+Y        LKQ +
Sbjct: 366 AESCPFCSGNCNCKACLRCDGSLKKMAELDYLKMKLSDEEKFKHSRYLLQAVVPFLKQFN 425

Query: 187 EEQVMEKEVEAKIQGISLSELEVQKSDCSIDERLYCNNCKTSISDFHRNCPNCSYDLCLT 8
           +EQ++EKE+EAKIQG+S SEL++Q+  C+ +ER YC+NC+TSI DFHR+CPNCSYDLCL 
Sbjct: 426 QEQMLEKEIEAKIQGLSPSELKIQRVVCNKNERAYCDNCRTSIVDFHRSCPNCSYDLCLI 485

Query: 7   CC 2
           CC
Sbjct: 486 CC 487


>ref|XP_002271972.2| PREDICTED: uncharacterized protein LOC100261347 [Vitis vinifera]
          Length = 1199

 Score =  213 bits (543), Expect = 1e-53
 Identities = 98/165 (59%), Positives = 120/165 (72%), Gaps = 7/165 (4%)
 Frame = -3

Query: 475 STMCHQCQRNDKGPVVRCTKCKSKRYCHKCLN-WYPHLSHTEVAESCPVCRGNCNCKQCL 299
           S MCHQCQRNDKG VVRC KCK KR+C  CL  WYPH+S   +AESCP C GNCNCK CL
Sbjct: 485 SLMCHQCQRNDKGRVVRCRKCKRKRFCIPCLETWYPHMSEEAIAESCPFCSGNCNCKACL 544

Query: 298 RSNKEKTKM------ERKLSKKEKVNYSKYXXXXXXXXLKQIDEEQVMEKEVEAKIQGIS 137
           R +    KM      + KLS +EK  +S+Y        LKQ ++EQ++EKE+EAKIQG+S
Sbjct: 545 RCDGSLKKMAELDYLKMKLSDEEKFKHSRYLLQAVVPFLKQFNQEQMLEKEIEAKIQGLS 604

Query: 136 LSELEVQKSDCSIDERLYCNNCKTSISDFHRNCPNCSYDLCLTCC 2
            SEL++Q+  C+ +ER YC+NC+TSI DFHR+CPNCSYDLCL CC
Sbjct: 605 PSELKIQRVVCNKNERAYCDNCRTSIVDFHRSCPNCSYDLCLICC 649


>ref|XP_003555059.1| PREDICTED: uncharacterized protein LOC100780803 [Glycine max]
          Length = 947

 Score =  209 bits (531), Expect = 3e-52
 Identities = 92/162 (56%), Positives = 122/162 (75%), Gaps = 3/162 (1%)
 Frame = -3

Query: 478 DSTMCHQCQRNDKGPVVRCTKCKSKRYCHKCL-NWYPHLSHTEVAESCPVCRGNCNCKQC 302
           +S MCHQCQRNDKG +VRCTKCK KR+C  CL NWYPHL   ++A+ CPVC GNCNCK C
Sbjct: 235 ESLMCHQCQRNDKGRIVRCTKCKRKRFCLPCLRNWYPHLKEEDIAQECPVCCGNCNCKAC 294

Query: 301 LRSNKEKTKMERKLSKKE--KVNYSKYXXXXXXXXLKQIDEEQVMEKEVEAKIQGISLSE 128
           LRS++   KM+ K +  E  K+ +S +        L+Q+DEEQ++E E+EAK+QG+S+S+
Sbjct: 295 LRSDEPIKKMKGKTNTDEDDKIEHSMHLLQVLLPYLRQLDEEQMIENEIEAKMQGLSVSK 354

Query: 127 LEVQKSDCSIDERLYCNNCKTSISDFHRNCPNCSYDLCLTCC 2
           L + K+D + DER+YC+NCKTSI D+HR+C  CS+DLCL CC
Sbjct: 355 LNIVKTDYAKDERVYCDNCKTSIFDYHRSCTKCSFDLCLICC 396


>ref|XP_003535763.1| PREDICTED: uncharacterized protein LOC100805723 [Glycine max]
          Length = 1222

 Score =  208 bits (529), Expect = 6e-52
 Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
 Frame = -3

Query: 526 LEGVTRKKPATKEDYGDSTMCHQCQRNDKGPVVRCTKCKSKRYCHKCL-NWYPHLSHTEV 350
           +  +++K P   ++  +S MCHQCQRNDKG VVRCT CK KR+C  C+ NWYPHL    +
Sbjct: 434 MPNISKKDPKCIKE--ESLMCHQCQRNDKGRVVRCTSCKRKRFCVHCIENWYPHLKEDYI 491

Query: 349 AESCPVCRGNCNCKQCLRSNK--EKTKMERKLSKKEKVNYSKYXXXXXXXXLKQIDEEQV 176
           AE+CPVCRGNCNCK CLRSN+  +K K + K ++ EKV  S +        L+ +DEEQ+
Sbjct: 492 AEACPVCRGNCNCKACLRSNELIKKMKKKAKTNEDEKVELSMHLLQVLLPYLRLLDEEQM 551

Query: 175 MEKEVEAKIQGISLSELEVQKSDCSIDERLYCNNCKTSISDFHRNCPNCSYDLCLTCC 2
           +E + EAKIQG+S+SEL + +++   DER+YC+NCKTSI D+HR+C  CS+DLCL CC
Sbjct: 552 IENKTEAKIQGLSVSELNIVQANFDEDERVYCDNCKTSIFDYHRSCTKCSFDLCLICC 609


>ref|XP_003592704.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|358345318|ref|XP_003636728.1| Lysine-specific
           demethylase 3B [Medicago truncatula]
           gi|355481752|gb|AES62955.1| Lysine-specific demethylase
           3B [Medicago truncatula] gi|355502663|gb|AES83866.1|
           Lysine-specific demethylase 3B [Medicago truncatula]
          Length = 1153

 Score =  203 bits (516), Expect = 2e-50
 Identities = 93/162 (57%), Positives = 117/162 (72%), Gaps = 3/162 (1%)
 Frame = -3

Query: 478 DSTMCHQCQRNDKGPVVRCTKCKSKRYCHKCLN-WYPHLSHTEVAESCPVCRGNCNCKQC 302
           +S MCHQCQRNDKG VVRCTKCK KRYC  CLN WYPHL   ++AE+CPVC GNCNCK C
Sbjct: 339 ESLMCHQCQRNDKGRVVRCTKCKRKRYCIPCLNNWYPHLKEEKIAEACPVCCGNCNCKAC 398

Query: 301 LRSNK--EKTKMERKLSKKEKVNYSKYXXXXXXXXLKQIDEEQVMEKEVEAKIQGISLSE 128
           LRS+    + K + + +   +V  SKY        L ++DEEQ+ EKE+EAKIQG+SLSE
Sbjct: 399 LRSSVLINEIKKKTETNNSHEVEPSKYMLKVLFPYLSRLDEEQMAEKEIEAKIQGLSLSE 458

Query: 127 LEVQKSDCSIDERLYCNNCKTSISDFHRNCPNCSYDLCLTCC 2
           L ++ +D    ER+YC+ CKTSI D+HR+C  CS+D+CL CC
Sbjct: 459 LNIKVADIPKKERVYCDICKTSIFDYHRSCTKCSFDICLLCC 500


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