BLASTX nr result

ID: Coptis21_contig00020091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020091
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC71199.1| hypothetical protein OsI_03108 [Oryza sativa Indi...   170   1e-40
gb|ACN34085.1| unknown [Zea mays]                                     167   1e-39
ref|NP_001149044.1| LOC100282664 [Zea mays] gi|195624264|gb|ACG3...   167   1e-39
ref|XP_004164835.1| PREDICTED: actin-related protein 2/3 complex...   166   2e-39
ref|XP_004134509.1| PREDICTED: actin-related protein 2/3 complex...   166   2e-39

>gb|EEC71199.1| hypothetical protein OsI_03108 [Oryza sativa Indica Group]
           gi|222618970|gb|EEE55102.1| hypothetical protein
           OsJ_02859 [Oryza sativa Japonica Group]
          Length = 320

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/119 (70%), Positives = 95/119 (79%)
 Frame = +1

Query: 1   QEFVEARRSASLNNAXXXXXXXXXXXELEGAPSQALSANAGFFTFVISARHVEGRKLDRT 180
           QEFVEARR+++LNNA           EL+G PS AL+ANAGF TFV+  RHVEG+KLD+T
Sbjct: 195 QEFVEARRTSALNNAPSCLWSPVPPLELKGVPSDALNANAGFVTFVVFPRHVEGKKLDKT 254

Query: 181 VWSLLTFHAYVGYHVKCSEGFMHTRMRRRVESLIQALDRAKSDSEGSNRTAQSGSFKRL 357
           VWSLLTFHAYV YHVKCSEGFMHTRMRRRVE+LIQALDRAKSD+E   +    GSFKRL
Sbjct: 255 VWSLLTFHAYVSYHVKCSEGFMHTRMRRRVETLIQALDRAKSDAEKLKKLVNGGSFKRL 313


>gb|ACN34085.1| unknown [Zea mays]
          Length = 300

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/119 (69%), Positives = 93/119 (78%)
 Frame = +1

Query: 1   QEFVEARRSASLNNAXXXXXXXXXXXELEGAPSQALSANAGFFTFVISARHVEGRKLDRT 180
           QEFVEARR+A+LNN            EL+G  + AL+ANAGF TFV+  RHVEG+KLDRT
Sbjct: 172 QEFVEARRTAALNNVPSCMWSPVPPLELKGVSADALNANAGFVTFVVYPRHVEGKKLDRT 231

Query: 181 VWSLLTFHAYVGYHVKCSEGFMHTRMRRRVESLIQALDRAKSDSEGSNRTAQSGSFKRL 357
           VW+LLTFHAYV YHVKCSEGFMHTRMRRRVESLIQALDRAKSD+E   +    GSFKRL
Sbjct: 232 VWNLLTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKSDAEKLKKLVHGGSFKRL 290


>ref|NP_001149044.1| LOC100282664 [Zea mays] gi|195624264|gb|ACG33962.1| ARP2/3 complex
           34 kDa subunit [Zea mays] gi|195653745|gb|ACG46340.1|
           ARP2/3 complex 34 kDa subunit [Zea mays]
           gi|223945173|gb|ACN26670.1| unknown [Zea mays]
           gi|224030859|gb|ACN34505.1| unknown [Zea mays]
           gi|414591954|tpg|DAA42525.1| TPA: ARP2/3 complex subunit
           isoform 1 [Zea mays] gi|414591955|tpg|DAA42526.1| TPA:
           ARP2/3 complex subunit isoform 2 [Zea mays]
          Length = 323

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/119 (69%), Positives = 93/119 (78%)
 Frame = +1

Query: 1   QEFVEARRSASLNNAXXXXXXXXXXXELEGAPSQALSANAGFFTFVISARHVEGRKLDRT 180
           QEFVEARR+A+LNN            EL+G  + AL+ANAGF TFV+  RHVEG+KLDRT
Sbjct: 195 QEFVEARRTAALNNVPSCMWSPVPPLELKGVSADALNANAGFVTFVVYPRHVEGKKLDRT 254

Query: 181 VWSLLTFHAYVGYHVKCSEGFMHTRMRRRVESLIQALDRAKSDSEGSNRTAQSGSFKRL 357
           VW+LLTFHAYV YHVKCSEGFMHTRMRRRVESLIQALDRAKSD+E   +    GSFKRL
Sbjct: 255 VWNLLTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKSDAEKLKKLVHGGSFKRL 313


>ref|XP_004164835.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like,
           partial [Cucumis sativus]
          Length = 299

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 92/119 (77%)
 Frame = +1

Query: 1   QEFVEARRSASLNNAXXXXXXXXXXXELEGAPSQALSANAGFFTFVISARHVEGRKLDRT 180
           QEFVEARR+A LNNA           EL+GAPS ALSANAGF TFVI  RHVEG+++DR 
Sbjct: 174 QEFVEARRTAGLNNAPPCSWSLSPPQELKGAPSDALSANAGFVTFVIFTRHVEGKRVDRV 233

Query: 181 VWSLLTFHAYVGYHVKCSEGFMHTRMRRRVESLIQALDRAKSDSEGSNRTAQSGSFKRL 357
           +WSL TFHAYV YHVKCSEGFMHTRMRRRVESLIQALDRAK D+  + R   S SFKRL
Sbjct: 234 IWSLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDAIETRRKTHSRSFKRL 292


>ref|XP_004134509.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Cucumis sativus]
          Length = 320

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 92/119 (77%)
 Frame = +1

Query: 1   QEFVEARRSASLNNAXXXXXXXXXXXELEGAPSQALSANAGFFTFVISARHVEGRKLDRT 180
           QEFVEARR+A LNNA           EL+GAPS ALSANAGF TFVI  RHVEG+++DR 
Sbjct: 195 QEFVEARRTAGLNNAPPCSWSLSPPQELKGAPSDALSANAGFVTFVIFTRHVEGKRVDRV 254

Query: 181 VWSLLTFHAYVGYHVKCSEGFMHTRMRRRVESLIQALDRAKSDSEGSNRTAQSGSFKRL 357
           +WSL TFHAYV YHVKCSEGFMHTRMRRRVESLIQALDRAK D+  + R   S SFKRL
Sbjct: 255 IWSLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALDRAKPDAIETRRKTHSRSFKRL 313