BLASTX nr result

ID: Coptis21_contig00020077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020077
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   207   5e-52
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   189   2e-46
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   186   1e-45
ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...   186   2e-45

>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  207 bits (528), Expect = 5e-52
 Identities = 105/166 (63%), Positives = 129/166 (77%)
 Frame = +3

Query: 3    PPEPAAELAHNLLKRLEEFSMHSTEVNAHVKALRTLCKQKALTPEEGDTLVLKWVNQLLS 182
            PPEPAAELAHNLL R+EEFSMHSTEVNAHVKALRTLCK+KAL  +E ++LV+KWV QLLS
Sbjct: 649  PPEPAAELAHNLLIRIEEFSMHSTEVNAHVKALRTLCKRKALDADEAESLVIKWVQQLLS 708

Query: 183  KALRIIETYITEASDTSKASSFLTPPSSLGRKEKKRSATSKALLRVVTAVYTVGSLAIVS 362
            KA RI+E YIT  S+T+K  +F TPP S  RK K+ +A S+ L   VTAVY++G L I+ 
Sbjct: 709  KASRILEKYITGDSETNKGDAFFTPPRSATRKGKRAAALSRLLSEAVTAVYSIGFLVIIC 768

Query: 363  ASAELKGITPLLHTIITSGSSETKQKKLPGSPVTIEKLAPSVYTQA 500
             SA+   I PLLHTIITSG+S+ K  KLPG  V++++ APS+Y QA
Sbjct: 769  PSADTSTIIPLLHTIITSGNSDPKLSKLPGPQVSLKQTAPSLYIQA 814


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  189 bits (481), Expect = 2e-46
 Identities = 96/166 (57%), Positives = 122/166 (73%)
 Frame = +3

Query: 3    PPEPAAELAHNLLKRLEEFSMHSTEVNAHVKALRTLCKQKALTPEEGDTLVLKWVNQLLS 182
            PPEPAA L HNLL R+EEF+MHSTEVNAHVKALRTLCK++ L P+E D LV K V++LLS
Sbjct: 689  PPEPAAALGHNLLTRIEEFNMHSTEVNAHVKALRTLCKRQVLNPDEADDLVQKCVHKLLS 748

Query: 183  KALRIIETYITEASDTSKASSFLTPPSSLGRKEKKRSATSKALLRVVTAVYTVGSLAIVS 362
            KA +I++ YI+EAS+ +  S F TPP    RK +     S++L R +TAVYT+GSL I+ 
Sbjct: 749  KASQILDKYISEASEANIDSDFRTPPGGARRKGRTALTMSRSLSRAITAVYTIGSLVIIC 808

Query: 363  ASAELKGITPLLHTIITSGSSETKQKKLPGSPVTIEKLAPSVYTQA 500
             SA L  I P+LHTIITSGSS+TK  KL G+   +++ APS+Y  A
Sbjct: 809  PSANLDAIIPILHTIITSGSSDTKLNKLQGNTFPLKQAAPSLYIHA 854


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  189 bits (481), Expect = 2e-46
 Identities = 96/166 (57%), Positives = 122/166 (73%)
 Frame = +3

Query: 3    PPEPAAELAHNLLKRLEEFSMHSTEVNAHVKALRTLCKQKALTPEEGDTLVLKWVNQLLS 182
            PPEPAA L HNLL R+EEF+MHSTEVNAHVKALRTLCK++ L P+E D LV K V++LLS
Sbjct: 730  PPEPAAALGHNLLTRIEEFNMHSTEVNAHVKALRTLCKRQVLNPDEADDLVQKCVHKLLS 789

Query: 183  KALRIIETYITEASDTSKASSFLTPPSSLGRKEKKRSATSKALLRVVTAVYTVGSLAIVS 362
            KA +I++ YI+EAS+ +  S F TPP    RK +     S++L R +TAVYT+GSL I+ 
Sbjct: 790  KASQILDKYISEASEANIDSDFRTPPGGARRKGRTALTMSRSLSRAITAVYTIGSLVIIC 849

Query: 363  ASAELKGITPLLHTIITSGSSETKQKKLPGSPVTIEKLAPSVYTQA 500
             SA L  I P+LHTIITSGSS+TK  KL G+   +++ APS+Y  A
Sbjct: 850  PSANLDAIIPILHTIITSGSSDTKLNKLQGNTFPLKQAAPSLYIHA 895


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  186 bits (473), Expect = 1e-45
 Identities = 95/165 (57%), Positives = 123/165 (74%)
 Frame = +3

Query: 3    PPEPAAELAHNLLKRLEEFSMHSTEVNAHVKALRTLCKQKALTPEEGDTLVLKWVNQLLS 182
            PPEPAA+LAHNLLKR+ +F+MHSTEV+AH+KAL+TLCK+KA   +E + LVLKW +Q+LS
Sbjct: 704  PPEPAADLAHNLLKRVLQFNMHSTEVDAHLKALKTLCKRKASNLKEAEALVLKWFHQVLS 763

Query: 183  KALRIIETYITEASDTSKASSFLTPPSSLGRKEKKRSATSKALLRVVTAVYTVGSLAIVS 362
            +A  IIE +I+E S+ +   SF TPP S  RK +K  A SKAL + +TA+YTVGSL IV 
Sbjct: 764  RASGIIEKFISENSEQNAEGSFFTPPRSGTRKGRKSVAKSKALSKAITAIYTVGSLVIVC 823

Query: 363  ASAELKGITPLLHTIITSGSSETKQKKLPGSPVTIEKLAPSVYTQ 497
             SA++  + PLLHTIITSGSS     KLPG   ++++ APS Y Q
Sbjct: 824  PSADMSNVVPLLHTIITSGSSGPILNKLPGPSTSLQQEAPSFYIQ 868


>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit
           D3-like, partial [Cucumis sativus]
          Length = 929

 Score =  186 bits (472), Expect = 2e-45
 Identities = 95/167 (56%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   PPEPAAELAHNLLKRLEEFSMHSTEVNAHVKALRTLCKQKALTPEEGDTLVLKWVNQLLS 182
           PPEPAA+LAH LLKR+EEF+MH TEVNAHVK L+TLCK+KA    E D L+LKWVNQLLS
Sbjct: 308 PPEPAADLAHELLKRVEEFNMHPTEVNAHVKTLKTLCKRKASQSTEADALILKWVNQLLS 367

Query: 183 KALRIIETYITEASDTSKASSFLTPPSSLG-RKEKKRSATSKALLRVVTAVYTVGSLAIV 359
           KA  I+E YI+  ++ +K  +F TPP   G R  KK SA SK+L R +TA YT+GSL ++
Sbjct: 368 KASDILEKYISNHAEANKDVNFTTPPPKSGSRMGKKASARSKSLSRAITAAYTIGSLILI 427

Query: 360 SASAELKGITPLLHTIITSGSSETKQKKLPGSPVTIEKLAPSVYTQA 500
             SA++  I PLLHTIITS + + K  KLP    ++++ APS+Y QA
Sbjct: 428 CPSADMTTIVPLLHTIITSENRDLKSNKLPIQTASLKETAPSLYIQA 474


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