BLASTX nr result

ID: Coptis21_contig00020076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020076
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CBI37967.3| unnamed protein product [Vitis vinifera]               66   4e-09
gb|AAK27803.1|AC022457_6 hypothetical protein [Oryza sativa Japo...    64   1e-08
dbj|BAD20095.1| unknown protein [Oryza sativa Japonica Group]          64   1e-08
dbj|BAC83684.1| unknown protein [Oryza sativa Japonica Group]          64   1e-08

>ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|222848468|gb|EEE86015.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/112 (31%), Positives = 65/112 (58%)
 Frame = -3

Query: 437 KQVMASREQTRWSPMMDEILVKLLLDHTLNGTGRTSKNGWESETLSMVARELNQRLNLSV 258
           + V+  R +  W+P  D  LV+L +D   +  GRT+ N +++E +  V R+ N+R ++++
Sbjct: 5   QDVILGRPKAEWTPTRDAYLVELFIDQ--HNCGRTAYNEFKNEMIRSVTRDFNKRFSMNL 62

Query: 257 GDDNVRSRMKTLKRDYIAVKELLERAKFGFSYNQQTKCIDADRQAWDVYFRV 102
            +  V++R   +K+DY  VK LL  +  GF +++  + + AD + WD Y  V
Sbjct: 63  EESQVKNRYNVMKKDYGVVKTLLTHS--GFGWDESRQMVVADDKVWDSYIAV 112


>emb|CBI37967.3| unnamed protein product [Vitis vinifera]
          Length = 2102

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = -3

Query: 437  KQVMASREQTRWSPMMDEILVKLLLDHTLNGT---GRTSKNGWESETLSMVARELNQRLN 267
            K V   R  T W   MD  LV  L++    G    G  +K  +     +MVARE+ +   
Sbjct: 1977 KSVSEKRNLT-WIDEMDNFLVDRLMEQMHKGQKIGGVFTKTAY-----AMVAREIGENFE 2030

Query: 266  LSVGDDNVRSRMKTLKRDYIAVKELLERAKFGFSYNQQTKCIDADRQAWDVYFRVIYLTI 87
            LS   +++++RMKTLK+++ A +E+L+    GF +N+ T+ I+A  + W  Y +V  + +
Sbjct: 2031 LSCNSEHIKNRMKTLKKNFYAAQEVLQNGS-GFGFNESTQMIEATTEVWTTYTKVKKIKL 2089

Query: 86   L*QIITMFIT 57
            +     +F++
Sbjct: 2090 IYYFYLLFLS 2099


>gb|AAK27803.1|AC022457_6 hypothetical protein [Oryza sativa Japonica Group]
           gi|31432592|gb|AAP54207.1| hypothetical protein
           LOC_Os10g33030 [Oryza sativa Japonica Group]
          Length = 367

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/109 (28%), Positives = 59/109 (54%)
 Frame = -3

Query: 437 KQVMASREQTRWSPMMDEILVKLLLDHTLNGTGRTSKNGWESETLSMVARELNQRLNLSV 258
           +Q + + ++ RWS  M   L++LL DH + G    ++N W  E  + +   LN +   S 
Sbjct: 42  RQEIGTAKRARWSHQMKMFLIELLTDHDVPGF--RTQNAWSKEAWTNIVCRLNTKFGTSF 99

Query: 257 GDDNVRSRMKTLKRDYIAVKELLERAKFGFSYNQQTKCIDADRQAWDVY 111
             + V+ + + LK+DY +VK+LL+++  GF ++     + A +  WD +
Sbjct: 100 TTNQVKQKEQDLKKDYRSVKDLLDQS--GFGWDSDRMMVSAPQSVWDTF 146


>dbj|BAD20095.1| unknown protein [Oryza sativa Japonica Group]
          Length = 367

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/109 (28%), Positives = 59/109 (54%)
 Frame = -3

Query: 437 KQVMASREQTRWSPMMDEILVKLLLDHTLNGTGRTSKNGWESETLSMVARELNQRLNLSV 258
           +Q + + ++ RWS  M   L++LL DH + G    ++N W  E  + +   LN +   S 
Sbjct: 42  RQEIGTTKRARWSHQMKMFLIELLTDHDVPGF--RTQNAWSKEAWTNIVCRLNTKFGTSF 99

Query: 257 GDDNVRSRMKTLKRDYIAVKELLERAKFGFSYNQQTKCIDADRQAWDVY 111
             + V+ + + LK+DY +VK+LL+++  GF ++     + A +  WD +
Sbjct: 100 TTNQVKQKEQDLKKDYRSVKDLLDQS--GFGWDSDRMMVSAPQSVWDTF 146


>dbj|BAC83684.1| unknown protein [Oryza sativa Japonica Group]
          Length = 240

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/109 (28%), Positives = 59/109 (54%)
 Frame = -3

Query: 437 KQVMASREQTRWSPMMDEILVKLLLDHTLNGTGRTSKNGWESETLSMVARELNQRLNLSV 258
           +Q + + ++ RWS  M   L++LL DH + G    ++N W  E  + +   LN +   S 
Sbjct: 42  RQEIGTTKRARWSHQMKMFLIELLTDHDVPGF--RTQNAWSKEAWTNIVCRLNTKFGTSF 99

Query: 257 GDDNVRSRMKTLKRDYIAVKELLERAKFGFSYNQQTKCIDADRQAWDVY 111
             + V+ + + LK+DY +VK+LL+++  GF ++     + A +  WD +
Sbjct: 100 TTNQVKQKEQDLKKDYRSVKDLLDQS--GFGWDSDRMMVSAPQSVWDTF 146


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