BLASTX nr result

ID: Coptis21_contig00020071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020071
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330393.1| predicted protein [Populus trichocarpa] gi|1...    78   1e-12
ref|XP_003596480.1| hypothetical protein MTR_2g080990 [Medicago ...    70   4e-10
ref|XP_003543267.1| PREDICTED: uncharacterized protein LOC100790...    69   6e-10
ref|XP_002284509.1| PREDICTED: uncharacterized protein LOC100255...    68   2e-09
ref|NP_001242480.1| uncharacterized protein LOC100779923 [Glycin...    64   2e-08

>ref|XP_002330393.1| predicted protein [Populus trichocarpa] gi|118481783|gb|ABK92830.1|
           unknown [Populus trichocarpa]
           gi|222871778|gb|EEF08909.1| predicted protein [Populus
           trichocarpa]
          Length = 99

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 50/99 (50%), Positives = 59/99 (59%)
 Frame = -3

Query: 663 KSRNQKKDKKNGAASMDISTPTVSDTPQAMDTTEVTAKDSVHGVLNRKIKKGVPMKRSKN 484
           K+RN+KK+K NGA SMD++ PTVSD PQAMDT+E  A+ S      RK  KG PMKRSKN
Sbjct: 3   KNRNKKKEK-NGAVSMDVAEPTVSDLPQAMDTSESGAQKSAPVTSVRK-TKGRPMKRSKN 60

Query: 483 VRKMXXXXXXXXXXXXXXXXXXXXXXKVSRTKSAKLLYE 367
           VRKM                      K +RT+SAK LYE
Sbjct: 61  VRKMKAIAKAISNNEITVEKGLKKDGKTTRTQSAKKLYE 99


>ref|XP_003596480.1| hypothetical protein MTR_2g080990 [Medicago truncatula]
           gi|355485528|gb|AES66731.1| hypothetical protein
           MTR_2g080990 [Medicago truncatula]
           gi|388520857|gb|AFK48490.1| unknown [Medicago
           truncatula]
          Length = 103

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -3

Query: 663 KSRNQKKDKKNGAASMDISTPTVSDTPQAMDTTEVTAKDSVHG--VLNRKIKKGVPMKRS 490
           K+RN+ K  KNG  SMDI+   VS+ PQAMDT+E  AK  V G   + +  + G PMKRS
Sbjct: 3   KNRNKNKKNKNGTVSMDITDTIVSEAPQAMDTSESGAKIKVAGGATILKVKQNGRPMKRS 62

Query: 489 KNVRKMXXXXXXXXXXXXXXXXXXXXXXKVSRTKSAKLLYE 367
           KNVRKM                      K SR +SAK LYE
Sbjct: 63  KNVRKMKKIAKAISANEKSAARVSKSENKKSRVQSAKTLYE 103


>ref|XP_003543267.1| PREDICTED: uncharacterized protein LOC100790442 [Glycine max]
          Length = 101

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = -3

Query: 663 KSRNQKKDKKNGAASMDISTPTVSDTPQAMDTTEVTAKDSVHGVLNRKIK-KGVPMKRSK 487
           K+RN KK K+NG  SMD +  +VS+ PQAMDT+E    ++V G    K+K KG PMKRSK
Sbjct: 3   KNRNNKK-KRNGVVSMDTTDASVSEQPQAMDTSESGVLNTVSGATIMKMKQKGRPMKRSK 61

Query: 486 NVRKMXXXXXXXXXXXXXXXXXXXXXXKVSRTKSAKLLYE 367
           NVRKM                      K +R +SAK LYE
Sbjct: 62  NVRKMKAVAKAVSANEKSVAKLSKNESKKNRVQSAKTLYE 101


>ref|XP_002284509.1| PREDICTED: uncharacterized protein LOC100255528 [Vitis vinifera]
           gi|147846451|emb|CAN79516.1| hypothetical protein
           VITISV_031215 [Vitis vinifera]
           gi|302143080|emb|CBI20375.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
 Frame = -3

Query: 660 SRNQKKDKKNGAASMDISTPTVSDTPQAMDTTEVTAKDSVHGVLNR---KIKKGVPMKRS 490
           ++N+ K K++G A MD + PT++D PQ+MDT+E  A  + H   +    K KKGV MKRS
Sbjct: 2   AKNRNKKKRSGVAPMDTAEPTLTDVPQSMDTSESVATTATHFPASGDPIKRKKGVTMKRS 61

Query: 489 KNVRKMXXXXXXXXXXXXXXXXXXXXXXKVSRTKSAKLLYE 367
           KNVRKM                      K  R +SAK+LY+
Sbjct: 62  KNVRKMKAIAKAISQNEKSTEKISKNESKTMRAQSAKMLYD 102


>ref|NP_001242480.1| uncharacterized protein LOC100779923 [Glycine max]
           gi|255631006|gb|ACU15867.1| unknown [Glycine max]
          Length = 91

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = -3

Query: 663 KSRNQKKDKKNGAASMDISTPTVSDTPQAMDTTEVTAKDSVHGVLNRKIK-KGVPMKRSK 487
           K+RN KK K+NG  SMD +  +VS+  QAMDT+E    ++  G  N K+K KG PMKRSK
Sbjct: 3   KNRNNKK-KRNGVVSMDTTDASVSEQSQAMDTSESGVLNTASGATNMKMKQKGRPMKRSK 61

Query: 486 NVRKM 472
           NVRKM
Sbjct: 62  NVRKM 66


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