BLASTX nr result
ID: Coptis21_contig00020065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00020065
(1283 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 277 4e-72
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 235 2e-59
ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229... 223 8e-56
ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204... 221 4e-55
ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING... 167 5e-39
>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
gi|297734114|emb|CBI15361.3| unnamed protein product
[Vitis vinifera]
Length = 648
Score = 277 bits (709), Expect = 4e-72
Identities = 171/441 (38%), Positives = 234/441 (53%), Gaps = 24/441 (5%)
Frame = +3
Query: 21 NTNPDALSSPISNSKKGKEKISEAESMETNVCGICFSEEEKTIRGWIDSCNHYFCYLCIM 200
+++ + L S IS ++ K K EA ++N CGIC E+++ IRGW+DSC+HYFC++CIM
Sbjct: 24 SSDSETLGSDISANQCPKAK--EAVDFDSNCCGICLLEDDRAIRGWVDSCDHYFCFVCIM 81
Query: 201 EWAKLESRCPMCKQRFKEIVRKPKHGVFINERVVNVPVRNQ--------TSQIYDPYEQV 356
EWAK+ESRCPMCK+RF I R PK GVF +ER+VNVPVR+Q T+ DPY +V
Sbjct: 82 EWAKVESRCPMCKRRFSTIRRPPKPGVFPSERIVNVPVRDQAYHHFGNVTTGPSDPYAEV 141
Query: 357 NCSECHSSSDENXXXXXXXXXSAAHTYCVGLGATVPEGDWFCHDCTVSRNAQQA------ 518
+C CH ++DE+ SAAHTYCVGLG TVPEGDWFCHDCTVSR A+ A
Sbjct: 142 DCGICHGTADESFLLICDLCDSAAHTYCVGLGHTVPEGDWFCHDCTVSR-AEHANGEIDA 200
Query: 519 ------XXXXXXXXXXXXXXXXISEIVRESCTTGNVK-RSRGRRKSTRLERLPTRPARVP 677
I +IV E T + + S G R P+ P +
Sbjct: 201 VFDDRNNFRNFYRKPSAETHVSICDIVAEPYTREDERPPSIGSSHPNR----PSSPIALN 256
Query: 678 DRDRISKAGKTKSSVRTLRHCRNVHSRIRVMRENWNALRNGSVYFSRNRNVPNSVGKNDK 857
+ + S RTL CRNV++ I+ +RENWNALR+GS+ FS
Sbjct: 257 SENFAVNNSSSMSVARTLLRCRNVNAHIQALRENWNALRSGSMTFS-------------- 302
Query: 858 KQNDKPAVIYAQWKEPVSSSSNNCAQNSTIDSSAGERLKNAGSQDIDKAWKMLDIAKSVQ 1037
+ S +Q + +S ++ NA S D +KAWKM+D AKS+Q
Sbjct: 303 --------------SILGDSGGESSQKYNVGASCPKQDNNACSYDTEKAWKMMDKAKSIQ 348
Query: 1038 RAREATQRVNQNSSHQSCKQEPPKEEKNTSSTISMPKRSTFQQQDLGVVAPENYRHQLLE 1217
RA E T ++Q S H K PKE N S+ + R +D G +++H LE
Sbjct: 349 RACERTGIIHQVSKHPLGKVNVPKEVANVKSSSATNNRQ-LGNKDFG----WHFKHHSLE 403
Query: 1218 IAQRK---RKSQNCEEGRPSR 1271
++ +KS+N E+GR +R
Sbjct: 404 TDNKRYKPQKSENQEQGRVTR 424
>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
splicing factor, arginine/serine-rich 2,rnap interacting
protein, putative [Ricinus communis]
Length = 632
Score = 235 bits (600), Expect = 2e-59
Identities = 143/393 (36%), Positives = 201/393 (51%), Gaps = 47/393 (11%)
Frame = +3
Query: 102 ETNVCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKPKHGV 281
E+ +CGIC SE +RG IDSC+HYFC++CIMEWAK+ESRCPMCK+RF I R PK GV
Sbjct: 44 ESLICGICLSENWSAMRGQIDSCDHYFCFICIMEWAKIESRCPMCKRRFNNIHRPPKDGV 103
Query: 282 FINERVVNVPVRNQ--------TSQIYDPYEQVNCSECHSSSDENXXXXXXXXXSAAHTY 437
F +ER+VNVP R+Q T + +DPY QV CS CH++ DE+ SAAHTY
Sbjct: 104 FPSERLVNVPKRDQVYHLFGNTTVEPFDPYAQVQCSICHTAEDESLLLLCDLCDSAAHTY 163
Query: 438 CVGLGATVPEGDWFCHDCTVSRNAQQAXXXXXXXXXXXXXXXXISEIVRES--------- 590
CVGLG TVPE DWFCHDC VSR + SE+V +
Sbjct: 164 CVGLGFTVPECDWFCHDCAVSRTEHENFQKDEDNITQTLSVK--SEVVLAAEPYVAVNSQ 221
Query: 591 ----------------CTTGNVKRSRGRRKSTRLERLPTRPARVPD-----RDRISKAG- 704
C + N R R +S+++ R + + D R+ ++ G
Sbjct: 222 NTSENYNAGAENGANFCQSDNQSIGRPRARSSQVPSPSERLSNLADDMSQPRETTTRTGP 281
Query: 705 ---KTKSSVRTLRHCRNVHSRIRVMRENWNALRNGSVYFSRN--RNVPNSVGKNDKKQND 869
+S RTLR CR+VHS +R +RENW+ALR+GS+ FS + + S+ K
Sbjct: 282 GQETPQSDARTLRRCRDVHSYVRALRENWDALRSGSLRFSSSSVESCSRSIAK-----CY 336
Query: 870 KPAVIYAQWKEPVSSSSNNCAQNSTIDSSAGERLKNAGSQDIDKAWKMLDIAKSVQRARE 1049
P V + + + SS + Q + D G ++ S D KAWKM+ AKS+ + +
Sbjct: 337 TPVVTHESSGQSHTMSSTSGQQLTINDGLPGTFAQDRHSHDAKKAWKMMAKAKSIHQGSK 396
Query: 1050 ---ATQRVNQNSSHQSCKQEPPKEEKNTSSTIS 1139
++ ++ SC + + TS ++
Sbjct: 397 NPSTKGNASRKATGSSCSLHMLRSQFGTSGMVN 429
>ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229274 [Cucumis sativus]
Length = 398
Score = 223 bits (568), Expect = 8e-56
Identities = 130/342 (38%), Positives = 186/342 (54%), Gaps = 15/342 (4%)
Frame = +3
Query: 105 TNVCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKPKHGVF 284
+++C ICFSE+ K RG +DSC+HYFC++CIMEWA++ESRCP CK RF + R K
Sbjct: 53 SSICVICFSEDGKAERGKLDSCDHYFCFVCIMEWARIESRCPACKGRFTVVHRIAKDPCR 112
Query: 285 INERVVNVPVRNQ------TSQIYDPYEQVNCSECHSSSDENXXXXXXXXXSAAHTYCVG 446
+ ER+VN+P+RNQ +++I DPY + C+ C DE SAAHT+CVG
Sbjct: 113 LRERIVNIPMRNQDQSASGSARIGDPYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVG 172
Query: 447 LGATVPEGDWFCHDCTVSR-----NAQQAXXXXXXXXXXXXXXXXISEIVRE-SCTTGNV 608
LGA VPEGDW+CHDCT++R IS+IV+E S T ++
Sbjct: 173 LGANVPEGDWYCHDCTIARAQHTDTELDTSFIKQNQTTTVEPRIAISDIVKESSAQTVSI 232
Query: 609 KRSRGRRKSTR--LERLPTRPARVPDRDRISKAGKTK-SSVRTLRHCRNVHSRIRVMREN 779
R S R +P+ V + S+ GK +S RTL CRN+HS IR +R+N
Sbjct: 233 TRRGALLHSNREPPSIVPSSRRSVAQKSLPSRGGKAAGTSARTLHRCRNIHSYIRALRDN 292
Query: 780 WNALRNGSVYFSRNRNVPNSVGKNDKKQNDKPAVIYAQWKEPVSSSSNNCAQNSTIDSSA 959
W+A+R GS+ F + + G + K+ +I Q +P + S Q +T+ S
Sbjct: 293 WDAVRKGSLRFPASSS-STYCGNSSKRDTGGAELINKQTNQPHAIS----LQATTLPES- 346
Query: 960 GERLKNAGSQDIDKAWKMLDIAKSVQRAREATQRVNQNSSHQ 1085
N S D++KAW+M++IAK+ + RE Q + S Q
Sbjct: 347 -----NGNSCDVEKAWRMMEIAKA-KSIREGDQTLRHPVSRQ 382
>ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204928 [Cucumis sativus]
Length = 375
Score = 221 bits (562), Expect = 4e-55
Identities = 125/324 (38%), Positives = 179/324 (55%), Gaps = 15/324 (4%)
Frame = +3
Query: 105 TNVCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKPKHGVF 284
+++C ICFSE+ K RG +DSC+HYFC++CIMEWA++ESRCP CK RF + R K
Sbjct: 53 SSICVICFSEDGKAERGKLDSCDHYFCFVCIMEWARIESRCPACKGRFTVVHRIAKDPCR 112
Query: 285 INERVVNVPVRNQ------TSQIYDPYEQVNCSECHSSSDENXXXXXXXXXSAAHTYCVG 446
+ ER+VN+P+RNQ +++I DPY + C+ C DE SAAHT+CVG
Sbjct: 113 LRERIVNIPMRNQDQSASGSARIGDPYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVG 172
Query: 447 LGATVPEGDWFCHDCTVSR-----NAQQAXXXXXXXXXXXXXXXXISEIVRE-SCTTGNV 608
LGA VPEGDW+CHDCT++R IS+IV+E S T ++
Sbjct: 173 LGANVPEGDWYCHDCTIARAQHTDTELDTSFIKQNQTTTVEPRIAISDIVKESSAQTVSI 232
Query: 609 KRSRGRRKSTR--LERLPTRPARVPDRDRISKAGKTK-SSVRTLRHCRNVHSRIRVMREN 779
R S R +P+ V + S+ GK +S RTL CRN+HS IR +R+N
Sbjct: 233 TRRGALLHSNREPPSIVPSSRRSVAQKSLPSRGGKAAGTSARTLHRCRNIHSYIRALRDN 292
Query: 780 WNALRNGSVYFSRNRNVPNSVGKNDKKQNDKPAVIYAQWKEPVSSSSNNCAQNSTIDSSA 959
W+A+R GS+ F + + G + K+ +I Q +P + S Q +T+ S
Sbjct: 293 WDAVRKGSLRFPASSS-STYCGNSSKRDTGGAELINKQTNQPHAIS----LQATTLPES- 346
Query: 960 GERLKNAGSQDIDKAWKMLDIAKS 1031
N S D++KAW+M++IAK+
Sbjct: 347 -----NGNSCDVEKAWRMMEIAKA 365
>ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
domain-containing protein 1-like [Glycine max]
Length = 182
Score = 167 bits (423), Expect = 5e-39
Identities = 78/164 (47%), Positives = 102/164 (62%), Gaps = 8/164 (4%)
Frame = +3
Query: 36 ALSSPISNSKKGKEKISEAESMETNVCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKL 215
AL SP K+ + + E + E CGIC++E +I G ID C+H+FC++CIMEWAK
Sbjct: 5 ALGSP---KKRLRAQTEEEDEEEVVCCGICYAESGVSIAGEIDCCSHHFCFVCIMEWAKH 61
Query: 216 ESRCPMCKQRFKEIVRKPKHGVFINERVVNVPVRNQTSQIY--------DPYEQVNCSEC 371
ESRCP+C+QRF + R P HGVF + R V VP R+Q + D Y + C C
Sbjct: 62 ESRCPICRQRFSNVRRLPMHGVFSSSRDVKVPHRDQLYHPHGNMATGPADSYTETKCGVC 121
Query: 372 HSSSDENXXXXXXXXXSAAHTYCVGLGATVPEGDWFCHDCTVSR 503
H+ +DE+ +A+HTYCVGLG TVPEGDWFCHDC +SR
Sbjct: 122 HAGTDEHLLLLCDLCDTASHTYCVGLGYTVPEGDWFCHDCAISR 165