BLASTX nr result

ID: Coptis21_contig00020049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020049
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ83283.1| unknown [Medicago truncatula] gi|217072378|gb|ACJ...   108   1e-21
ref|NP_001237666.1| uncharacterized protein LOC100527548 [Glycin...    96   7e-18
emb|CAN74781.1| hypothetical protein VITISV_025062 [Vitis vinifera]    93   6e-17
ref|XP_002283255.1| PREDICTED: RING finger protein 126 [Vitis vi...    92   8e-17
ref|XP_003536519.1| PREDICTED: RING finger protein 43-like [Glyc...    92   1e-16

>gb|ACJ83283.1| unknown [Medicago truncatula] gi|217072378|gb|ACJ84549.1| unknown
           [Medicago truncatula] gi|388521239|gb|AFK48681.1|
           unknown [Medicago truncatula]
          Length = 161

 Score =  108 bits (270), Expect = 1e-21
 Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
 Frame = -1

Query: 610 MAGMLPGVELARRRRTXXXXXXXXXXXQYESSYSRELSVHQKIEPSTNMDETXXXXXXXX 431
           MAG LPGV L+ R+R+            Y  SY +E         +T +DET        
Sbjct: 1   MAGRLPGVGLSPRKRSEHYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRL 60

Query: 430 XXXXRSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTSTRQGKQSLQLDRKNS---QREVC 260
                 F + SR S+  P K  K F      K+     R+  +S  L R N    +R++C
Sbjct: 61  QKKLGHFFSSSRSSEHNPKKEGKEFQ-----KKDAGLGRKLLESSWLLRGNKFKKERKIC 115

Query: 259 SICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNLHCPYCRTSVN 125
           ++CLEDF  ++++MNL C HKYHS CLLPWL T+ HCPYCRT V+
Sbjct: 116 AVCLEDFLQDEEVMNLSCSHKYHSACLLPWLETHPHCPYCRTIVD 160


>ref|NP_001237666.1| uncharacterized protein LOC100527548 [Glycine max]
           gi|255632588|gb|ACU16644.1| unknown [Glycine max]
          Length = 166

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 63/166 (37%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
 Frame = -1

Query: 610 MAGMLPGVELARRRRTXXXXXXXXXXXQY--ESSYSRELSVHQKIEPSTNMDETXXXXXX 437
           MAG LPGV L  R+RT               +S +  E S+     P T +DET      
Sbjct: 1   MAGRLPGVGLLARKRTEQNHRYEHQHHATCRQSYHLGESSLEPPWIPLTVLDETALKARQ 60

Query: 436 XXXXXXRSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTSTRQGKQSLQLDRKNS---QRE 266
                   F +  R S+    +G+ + S  ++ K+     R+  +S  L R N     R+
Sbjct: 61  RLHKKLGHFFSSYRSSENPRKEGKVNQS--SYEKKDGGIGRKLLESSWLLRGNKFKKDRK 118

Query: 265 VCSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNLHCPYCRTSV 128
           VC++CLED   EQQ+MNL C HKYHS CLLPWL  + HCPYCRT V
Sbjct: 119 VCAVCLEDLGQEQQVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPV 164


>emb|CAN74781.1| hypothetical protein VITISV_025062 [Vitis vinifera]
          Length = 164

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 59/166 (35%), Positives = 77/166 (46%), Gaps = 5/166 (3%)
 Frame = -1

Query: 610 MAGMLPGVELARRRRTXXXXXXXXXXXQYESSYSRELSVHQKIEPSTNMDETXXXXXXXX 431
           MAG LPGV +  RR +             E    RE   H     +  M ET        
Sbjct: 1   MAGTLPGVGVGSRRMSHHRHRQDDPLVFREPPPLRERLQHST---TVTMGETALMARQRL 57

Query: 430 XXXXRSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTST-----RQGKQSLQLDRKNSQRE 266
                 + A SR SK+  + G +  +H    K   ++      R  K  L    K S  E
Sbjct: 58  DRKLAHYRASSRSSKQ-GANGSRESNHKERTKRNSSTGSXILGRPWKLQLNTGSK-SNGE 115

Query: 265 VCSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNLHCPYCRTSV 128
           +CS+CLEDF+ EQQ+M L C HKYHS+CL+PWL ++ HCP CR  V
Sbjct: 116 MCSVCLEDFEGEQQMMELSCSHKYHSNCLMPWLASHPHCPTCRNPV 161


>ref|XP_002283255.1| PREDICTED: RING finger protein 126 [Vitis vinifera]
          Length = 164

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 60/165 (36%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
 Frame = -1

Query: 610 MAGMLPGVELARRRRTXXXXXXXXXXXQYESSYSRELSVHQKIEPSTNMDETXXXXXXXX 431
           MAG LPGV +  RR +             E    RE   H     +  M ET        
Sbjct: 1   MAGTLPGVGVGSRRMSHHRHRQDDPLVFREPPPLRERLQHST---TVTMGETALMARQRL 57

Query: 430 XXXXRSFSAPSRFSKRLPSKGEKSFSHLTHVKETHT--STRQGKQ-SLQLDR-KNSQREV 263
                 + A SR SK+  + G +  +H    K   +  S   G+   LQL+    S  E+
Sbjct: 58  DRKLAHYRASSRSSKQ-GANGSRESNHKERTKRNSSIGSKILGRPWKLQLNTGSKSNGEM 116

Query: 262 CSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNLHCPYCRTSV 128
           CS+CLEDF+ EQQ+M L C HKYHS+CL+PWL ++ HCP CR  V
Sbjct: 117 CSVCLEDFEGEQQMMELSCSHKYHSNCLMPWLASHPHCPTCRNPV 161


>ref|XP_003536519.1| PREDICTED: RING finger protein 43-like [Glycine max]
          Length = 173

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 65/171 (38%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
 Frame = -1

Query: 610 MAGMLPGVELARRRRTXXXXXXXXXXXQY--ESSYSRELSVHQKIE-PSTNMDETXXXXX 440
           MAG LPGV L  R+RT                S Y RE S       P T +DET     
Sbjct: 1   MAGRLPGVGLLARKRTEKNYRYEHQYLPTCRHSYYPRESSSFDPPWIPLTVLDETALKAR 60

Query: 439 XXXXXXXRSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTSTRQGKQSLQLDRKNS---QR 269
                    F +  R S+    +G+ S +   + K+     R+  +   L R N     R
Sbjct: 61  QRLHKKLEHFFSSYRSSENPRKEGKVSQNR--YEKKDGGIGRKLLECSWLLRGNKLKKDR 118

Query: 268 EVCSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNLHCPYCRTSVNYSP 116
           +VC++CLED   EQQ+MNL C HKYHS CLL WL ++ HCPYCRT V  SP
Sbjct: 119 KVCAVCLEDLGLEQQVMNLSCSHKYHSACLLRWLASHPHCPYCRTPVQPSP 169


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