BLASTX nr result

ID: Coptis21_contig00020048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020048
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus ...   127   7e-28
emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x...   119   2e-25
emb|CBI17350.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vi...   119   3e-25
ref|XP_002303406.1| histidine kinase osmosensor protein [Populus...   119   3e-25

>ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus communis]
           gi|223530872|gb|EEF32733.1| histidine kinase 1 plant,
           putative [Ricinus communis]
          Length = 1206

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/95 (66%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
 Frame = -3

Query: 283 AKMGSQG-RRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFV 107
           A MGS   R+  D++  F+ S+  NT+PRGRR +FH++V+E+EF YANT+CLSSYYSVFV
Sbjct: 21  APMGSPPIRKVFDKILTFAPSLRSNTLPRGRR-IFHRDVEEDEFQYANTHCLSSYYSVFV 79

Query: 106 ARLAIMVMLAILIGMLTVLTWHFTKSYTTKSINTL 2
            RLAIMVMLAILIG+LT+LTWHFTKSYT +S++TL
Sbjct: 80  VRLAIMVMLAILIGLLTILTWHFTKSYTKRSLDTL 114


>emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x canadensis]
          Length = 1249

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/104 (58%), Positives = 80/104 (76%)
 Frame = -3

Query: 313 SSSVSFQSPVAKMGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNC 134
           S +VS  +P+  M +  R+  +R+  F+ S  +NT P GRR +FH+EV++ EF Y NT+C
Sbjct: 13  SPTVSTGTPI--MATPLRKVCNRILGFATSCRKNTAPYGRR-IFHREVEQGEFQYGNTHC 69

Query: 133 LSSYYSVFVARLAIMVMLAILIGMLTVLTWHFTKSYTTKSINTL 2
           LSSYYSVFV RLAIM MLAILIG+LT+LTWHFT+SYT KS++TL
Sbjct: 70  LSSYYSVFVVRLAIMAMLAILIGLLTILTWHFTRSYTKKSLDTL 113


>emb|CBI17350.3| unnamed protein product [Vitis vinifera]
          Length = 1168

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = -3

Query: 277 MGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFVARL 98
           MGS  RR  +R+  F      N  P GRR +FH+EV++EEF Y + +CLSSYYSVFVARL
Sbjct: 1   MGSHLRRVFNRISGFVSPWRRNQAPHGRR-IFHREVQQEEFQYPSNSCLSSYYSVFVARL 59

Query: 97  AIMVMLAILIGMLTVLTWHFTKSYTTKSINTL 2
           AIMVMLAILIG+LT+LTWHFT+ YTTKSIN+L
Sbjct: 60  AIMVMLAILIGLLTILTWHFTRIYTTKSINSL 91


>ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vinifera]
          Length = 1235

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = -3

Query: 277 MGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFVARL 98
           MGS  RR  +R+  F      N  P GRR +FH+EV++EEF Y + +CLSSYYSVFVARL
Sbjct: 1   MGSHLRRVFNRISGFVSPWRRNQAPHGRR-IFHREVQQEEFQYPSNSCLSSYYSVFVARL 59

Query: 97  AIMVMLAILIGMLTVLTWHFTKSYTTKSINTL 2
           AIMVMLAILIG+LT+LTWHFT+ YTTKSIN+L
Sbjct: 60  AIMVMLAILIGLLTILTWHFTRIYTTKSINSL 91


>ref|XP_002303406.1| histidine kinase osmosensor protein [Populus trichocarpa]
           gi|222840838|gb|EEE78385.1| histidine kinase osmosensor
           protein [Populus trichocarpa]
          Length = 1149

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/92 (61%), Positives = 74/92 (80%)
 Frame = -3

Query: 277 MGSQGRRCSDRLCCFSLSMNENTIPRGRRRMFHKEVKEEEFSYANTNCLSSYYSVFVARL 98
           M +  R+  +R+  F+ S  +NT P GRR +FH+EV+++EF Y NT+CLSSYYSVFV RL
Sbjct: 1   MATPLRKVCNRILGFATSCRKNTAPYGRR-IFHREVEQDEFQYGNTHCLSSYYSVFVVRL 59

Query: 97  AIMVMLAILIGMLTVLTWHFTKSYTTKSINTL 2
           AIM MLAILIG+LT+LTWHFT+SYT KS++TL
Sbjct: 60  AIMAMLAILIGLLTILTWHFTRSYTKKSLDTL 91


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