BLASTX nr result

ID: Coptis21_contig00020042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020042
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535012.1| Disease resistance protein RPH8A, putative [...   261   1e-67
ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like prot...   241   2e-61
ref|XP_002524239.1| conserved hypothetical protein [Ricinus comm...   240   2e-61
ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like prot...   235   1e-59
ref|XP_002528440.1| Disease resistance protein RPP8, putative [R...   229   4e-58

>ref|XP_002535012.1| Disease resistance protein RPH8A, putative [Ricinus communis]
           gi|223524193|gb|EEF27370.1| Disease resistance protein
           RPH8A, putative [Ricinus communis]
          Length = 808

 Score =  261 bits (668), Expect = 1e-67
 Identities = 131/259 (50%), Positives = 185/259 (71%), Gaps = 2/259 (0%)
 Frame = +3

Query: 27  SSANESTRRWRRLLPHMKEDTIVALEEDTAQVMAQLMNEDMQLRVISIIGMGGIGKTTLA 206
           ++ANE  + WR+  P ++ED ++ L EDT  ++ +L + + +  V+SI+GMGG+GKTTLA
Sbjct: 135 NAANERLKWWRQPSPLIEEDDVIELVEDTKVLVEKLTSLEYRRSVVSIVGMGGLGKTTLA 194

Query: 207 FKVYNHHGVKSWFDCCVWIYVSKEYNLADILRTILVEFNGINVDEMEIFNQWSEEQLLRE 386
            K+Y H+ VK  FDC  W+YVSK+Y   +IL+ I+++ N +N +EME   +  EE+LL+ 
Sbjct: 195 KKLYTHNDVKYHFDCKAWVYVSKDYRRREILQGIIMDANALNKEEMENMEKLKEEELLKI 254

Query: 387 IYVFLESKHYLVVLDDIWSTEAWDVLKPAFPNGAKGSKVMLTSRNIKVALHADSQTKPYE 566
           +  FLE + YLVVLDDIWS EAWD +K AFP+G  GSK++LT+RN +VALHA    +P+E
Sbjct: 255 LSEFLEERRYLVVLDDIWSMEAWDGVKTAFPHGKNGSKILLTTRNKEVALHAGPGCEPHE 314

Query: 567 PQCLTEGESWALFCQKAFPNTN-CPSNLVELGTEMVKRCGGLPLAIVVLGGLLLTK-KTW 740
           P+ LTE ES  L  +KAFP  N  PS L +LG ++V +CGGLPLA+VVLGGLL  +  + 
Sbjct: 315 PRILTEEESLELLRRKAFPGRNRLPSELEKLGRDIVVKCGGLPLAVVVLGGLLSRQNNSP 374

Query: 741 DEWVEVHHNISWHLHKGDE 797
           +EW  V HNISWHL +G++
Sbjct: 375 EEWRRVLHNISWHLIRGED 393


>ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine
           max]
          Length = 910

 Score =  241 bits (614), Expect = 2e-61
 Identities = 127/270 (47%), Positives = 177/270 (65%), Gaps = 5/270 (1%)
 Frame = +3

Query: 3   IIKTGEVISSANESTRRWRRLLPHMKEDTIVALEEDTAQVMAQLMNEDMQLRVISIIGMG 182
           ++ T +  +++NE  R WR+  P+ +E+ ++ LE+D   +  QL+  +    V+SI+GMG
Sbjct: 132 VVMTRDDGNNSNERLRHWRQPSPYSEEEYVIELEDDMRLLFTQLLAVEPTPHVVSIVGMG 191

Query: 183 GIGKTTLAFKVYNHHGVKSWFDCCVWIYVSKEYNLADILRTILVEFNGINVDEMEIFNQW 362
           G+GKTTLA K+YNH  + + F+C  W+YVSKEY   D+L+ IL + + +  DEME   + 
Sbjct: 192 GLGKTTLAKKLYNHTRITNHFECKAWVYVSKEYRRRDVLQGILRDVDALTRDEME---KI 248

Query: 363 SEEQLLREIYVFLESKHYLVVLDDIWSTEAWDVLKPAFPNGAKGSKVMLTSRNIKVALHA 542
            EE+L+ ++   L  K YLVVLDDIW  E WD LK AFP G  GSK++LT+RN  VALHA
Sbjct: 249 PEEELVNKLRNVLSEKRYLVVLDDIWGMEVWDGLKSAFPRGKMGSKILLTTRNGDVALHA 308

Query: 543 DSQTKPYEPQCLTEGESWALFCQKAFPNTN-CPSNLVE---LGTEMVKRCGGLPLAIVVL 710
           D+ + P++ + LTE ES+ L C KAFP  N  P  LV+   L  E+V +CGGLPLA+VV+
Sbjct: 309 DACSNPHQLRTLTEDESFRLLCNKAFPGANGIPLELVQLKSLAKEIVVKCGGLPLAVVVV 368

Query: 711 GGLLLTK-KTWDEWVEVHHNISWHLHKGDE 797
           GGLL  K K+  EW  V  NISWHL +  E
Sbjct: 369 GGLLSRKLKSSGEWKRVLQNISWHLLEEQE 398


>ref|XP_002524239.1| conserved hypothetical protein [Ricinus communis]
           gi|223536516|gb|EEF38163.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 985

 Score =  240 bits (613), Expect = 2e-61
 Identities = 129/282 (45%), Positives = 175/282 (62%), Gaps = 33/282 (11%)
 Frame = +3

Query: 27  SSANESTRRWRRLLPHMKEDTIVALEEDTAQVMAQLMNEDMQLRVISIIGMGGIGKTTLA 206
           SSA+E  +R RR  PH +++ +++ +     + AQLM E+ +LRV+SI+G+GG+GKTTLA
Sbjct: 144 SSASEMQQRLRRSYPHDEDEHVISFDAVIRDLKAQLMIEEERLRVVSIVGIGGLGKTTLA 203

Query: 207 FKVYNHHGVKSWFDCCVWIYVSKEYNLADILRTILVEF-NGINVDEME------------ 347
            KVYN + VK  FDC  W ++S+++++ D+L  IL E  +   ++ ME            
Sbjct: 204 KKVYNDNRVKQHFDCYAWAFMSQQFSVRDLLVRILTEAADKSKLESMEQGKEIMKGEQPF 263

Query: 348 ---------------IFNQWSEEQLLREIYVFLESKHYLVVLDDIWSTEAWDVLKPAFPN 482
                          +  +  EE L++++Y  LE K YLVVLDDIWS EAWD LK AFPN
Sbjct: 264 ASKLETLKEEDMFKSMLERMKEEDLVKKLYKVLEEKRYLVVLDDIWSNEAWDCLKRAFPN 323

Query: 483 GAKGSKVMLTSRNIKVALHADSQTKPYEPQCLTEGESWALFCQKAFPN-----TNCPSNL 647
           G KGSKV+LT+RN K+A  AD  + P EP  LT  E+W L  +KAFPN      NCP   
Sbjct: 324 GKKGSKVLLTTRNKKIASSADPWSSPVEPPFLTSNEAWELLRRKAFPNHIATENNCPPEF 383

Query: 648 VELGTEMVKRCGGLPLAIVVLGGLLLTKKTWDEWVEVHHNIS 773
            +LG EMVK+CG LPLA+VVLGGLL TKKT  EW  V  +++
Sbjct: 384 EKLGREMVKKCGALPLAVVVLGGLLATKKTLKEWEIVQRSVN 425


>ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine
           max]
          Length = 912

 Score =  235 bits (599), Expect = 1e-59
 Identities = 124/270 (45%), Positives = 174/270 (64%), Gaps = 5/270 (1%)
 Frame = +3

Query: 3   IIKTGEVISSANESTRRWRRLLPHMKEDTIVALEEDTAQVMAQLMNEDMQLRVISIIGMG 182
           ++ T +  +++NE  R WR+  P+ +E+ ++ LE+D   +  QL+  +    V+SI+GMG
Sbjct: 132 VVMTRDDGNNSNERLRHWRQPSPYSEEEYVIELEDDMGLLFTQLLAVEPTPHVVSIVGMG 191

Query: 183 GIGKTTLAFKVYNHHGVKSWFDCCVWIYVSKEYNLADILRTILVEFNGINVDEMEIFNQW 362
           G+GKTTLA K+YNH  + + F+C  W+YVSKEY   D+L+ IL + + +  D ME   + 
Sbjct: 192 GLGKTTLAKKLYNHARITNHFECKAWVYVSKEYRRRDVLQGILKDVDALTRDGME--RRI 249

Query: 363 SEEQLLREIYVFLESKHYLVVLDDIWSTEAWDVLKPAFPNGAKGSKVMLTSRNIKVALHA 542
            EE+L+ ++   L  K YLVVLDDIW  E WD LK AFP G  GSK++LT+RN  VALH 
Sbjct: 250 PEEELVNKLRNVLSEKRYLVVLDDIWGMEVWDGLKSAFPRGKMGSKILLTTRNWDVALHV 309

Query: 543 DSQTKPYEPQCLTEGESWALFCQKAFPNT-NCPSNLVE---LGTEMVKRCGGLPLAIVVL 710
           D+ + P++ + LTE ES+ L C KAFP     P  LV+   L  E+V +CGGLPLA+VV+
Sbjct: 310 DACSNPHQLRPLTEDESFRLLCNKAFPGAKGIPLELVQLESLAKEIVVKCGGLPLAVVVV 369

Query: 711 GGLLLTK-KTWDEWVEVHHNISWHLHKGDE 797
           GGLL  K K+  EW  V  NISWHL +  E
Sbjct: 370 GGLLSRKLKSSGEWKRVLQNISWHLLEEQE 399


>ref|XP_002528440.1| Disease resistance protein RPP8, putative [Ricinus communis]
           gi|223532116|gb|EEF33923.1| Disease resistance protein
           RPP8, putative [Ricinus communis]
          Length = 920

 Score =  229 bits (585), Expect = 4e-58
 Identities = 114/241 (47%), Positives = 162/241 (67%), Gaps = 5/241 (2%)
 Frame = +3

Query: 81  EDTIVALEEDTAQVMAQLMNEDMQLRVISIIGMGGIGKTTLAFKVYNHHGVKSWFDCCVW 260
           E+ +V+L+     VM +LM E+ + RV+SI+G GG+GKTTLA KVYN + V   FDC  W
Sbjct: 159 EEELVSLKSCRKDVMDRLMIEEERFRVVSIVGFGGLGKTTLAKKVYNQNDVSEQFDCKAW 218

Query: 261 IYVSKEYNLADILRTILVEFNGINVDEMEIFNQWSEEQLLREIYVFLESKHYLVVLDDIW 440
           ++VS++    D+LR+IL++   +   + +I  +  +E+++  +Y FL  K YLVVLD+I+
Sbjct: 219 VFVSQKCATKDVLRSILIQ---VMRGKRDIHGRLKDEEMVEILYQFLREKRYLVVLDNIY 275

Query: 441 STEAWDVLKPAFPNGAKGSKVMLTSRNIKVALHADSQTKPYEPQCLTEGESWALFCQKAF 620
             E WD LK  FPNG KGSKV+ T+RN +VA+HAD  + P EP+ LT  ESW LFC+KAF
Sbjct: 276 RKEVWDSLKYVFPNGKKGSKVLFTTRNREVAMHADPWSSPIEPRLLTNEESWKLFCRKAF 335

Query: 621 PNTN-----CPSNLVELGTEMVKRCGGLPLAIVVLGGLLLTKKTWDEWVEVHHNISWHLH 785
              +     CP    ++G EMVK+C GLPLA+VVL G+L TK++ +EW  V  NI+ HL+
Sbjct: 336 AKNSVTDCTCPPEFEKIGREMVKKCSGLPLAVVVLAGILATKRSLNEWRAVQRNINAHLN 395

Query: 786 K 788
           K
Sbjct: 396 K 396


Top