BLASTX nr result

ID: Coptis21_contig00020032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020032
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550222.1| PREDICTED: uncharacterized protein LOC100796...    88   4e-15
ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799...    86   1e-14
gb|AFK36212.1| unknown [Lotus japonicus]                               86   2e-14
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    86   2e-14
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-14

>ref|XP_003550222.1| PREDICTED: uncharacterized protein LOC100796128 isoform 1 [Glycine
           max] gi|356563956|ref|XP_003550223.1| PREDICTED:
           uncharacterized protein LOC100796128 isoform 2 [Glycine
           max]
          Length = 573

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 44/49 (89%), Positives = 46/49 (93%), Gaps = 1/49 (2%)
 Frame = -3

Query: 147 QARQAYLIGNKGLAKELSLKGQLHNMHMKAAHGKAQEAIYRQRN-AAPE 4
           QARQAYLIGNK LAKELS+KGQLHNMHMKAAHGKAQE+IYRQRN  APE
Sbjct: 434 QARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVAPE 482


>ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799961 [Glycine max]
          Length = 572

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 42/49 (85%), Positives = 46/49 (93%), Gaps = 1/49 (2%)
 Frame = -3

Query: 147 QARQAYLIGNKGLAKELSLKGQLHNMHMKAAHGKAQEAIYRQRN-AAPE 4
           QARQAYL+GNK LAKELS+KGQLHN+HMKAAHGKAQE+IYRQRN  APE
Sbjct: 434 QARQAYLVGNKALAKELSVKGQLHNVHMKAAHGKAQESIYRQRNPVAPE 482


>gb|AFK36212.1| unknown [Lotus japonicus]
          Length = 161

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -3

Query: 147 QARQAYLIGNKGLAKELSLKGQLHNMHMKAAHGKAQEAIYRQRN 16
           QARQAYLIGNK LAKELS KGQLHNMHMKAAHGKAQE+IYRQRN
Sbjct: 26  QARQAYLIGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRN 69


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = -3

Query: 147 QARQAYLIGNKGLAKELSLKGQLHNMHMKAAHGKAQEAIYRQRN 16
           QARQAYLIGNK LAKELS+KGQLHNMHMKAAHG+AQE+IYRQRN
Sbjct: 436 QARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRN 479


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = -3

Query: 147 QARQAYLIGNKGLAKELSLKGQLHNMHMKAAHGKAQEAIYRQRN 16
           QARQAYLIGNK LAKELS+KGQLHNMHMKAAHG+AQE+IYRQRN
Sbjct: 436 QARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRN 479


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