BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020024
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis...   448   e-124
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]   447   e-123
ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Popu...   441   e-122
ref|XP_002328519.1| hypothetical protein POPTRDRAFT_294882 [Popu...   441   e-121
ref|XP_002512265.1| ATP-dependent helicase NAM7, putative [Ricin...   440   e-121

>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
            gi|297737082|emb|CBI26283.3| unnamed protein product
            [Vitis vinifera]
          Length = 877

 Score =  448 bits (1153), Expect = e-124
 Identities = 220/277 (79%), Positives = 249/277 (89%)
 Frame = +2

Query: 2    GIKQGHFSHIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGL 181
            G+K+ HFSHI LDEAGQASEPETM+P+S+LC+R+TVVVLAGDPMQLGPVIYSKDAETY L
Sbjct: 531  GVKRSHFSHILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCL 590

Query: 182  GKSYLERLFECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSID 361
            GKSYLERLFECEFYH EDENYVTKLVRNYRCHP IL LPS+LFYKGELI  K++  SS+ 
Sbjct: 591  GKSYLERLFECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDDKSSSM- 649

Query: 362  AYEDILPNKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGV 541
             + +ILPN+ FPVLFIG+QG DEREG+NPSWFNR EASKVVEII+KL  S DL + DIGV
Sbjct: 650  TWAEILPNRDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGV 709

Query: 542  ITPYRQQVLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYL 721
            ITPYRQQVLKLKK LE  +DMP +KVGSVEQFQGQER+VIIISTVRST++HNEFD+ H L
Sbjct: 710  ITPYRQQVLKLKKALEG-VDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCL 768

Query: 722  GFLSNPRRFNVAITRARSLVVIIGNPHIITKDPYWDK 832
            GFLSNPRRFNVAITRA+SL++IIGNPHII+KD YW+K
Sbjct: 769  GFLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNK 805


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score =  447 bits (1150), Expect = e-123
 Identities = 220/277 (79%), Positives = 248/277 (89%)
 Frame = +2

Query: 2    GIKQGHFSHIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGL 181
            G+K+ HFSHI LDEAGQASEPETM+P+S+LC+R+TVVVLAGDPMQLGPVIYSKDAETY L
Sbjct: 531  GVKRSHFSHILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCL 590

Query: 182  GKSYLERLFECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSID 361
            GKSYLERLFECEFYH EDENYVTKLVRNYRCHP IL LPS+LFYKGELI  K+   SS+ 
Sbjct: 591  GKSYLERLFECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDXKSSSM- 649

Query: 362  AYEDILPNKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGV 541
             + +ILPN+ FPVLFIG+QG DEREG+NPSWFNR EASKVVEII+KL  S DL + DIGV
Sbjct: 650  TWAEILPNRDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGV 709

Query: 542  ITPYRQQVLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYL 721
            ITPYRQQVLKLKK LE  +DMP +KVGSVEQFQGQER+VIIISTVRST++HNEFD+ H L
Sbjct: 710  ITPYRQQVLKLKKALEG-VDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCL 768

Query: 722  GFLSNPRRFNVAITRARSLVVIIGNPHIITKDPYWDK 832
            GFLSNPRRFNVAITRA+SL++IIGNPHII+KD YW+K
Sbjct: 769  GFLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNK 805


>ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Populus trichocarpa]
            gi|222836465|gb|EEE74872.1| hypothetical protein
            POPTRDRAFT_789212 [Populus trichocarpa]
          Length = 894

 Score =  441 bits (1135), Expect = e-122
 Identities = 214/279 (76%), Positives = 245/279 (87%), Gaps = 2/279 (0%)
 Frame = +2

Query: 2    GIKQGHFSHIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGL 181
            G+K+G FSHIFLDEAGQASEPE+M+ +SN C R+TVVVLAGDPMQLGPVI+S+DAE+YGL
Sbjct: 531  GVKRGQFSHIFLDEAGQASEPESMISVSNFCNRDTVVVLAGDPMQLGPVIFSRDAESYGL 590

Query: 182  GKSYLERLFECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGD--SS 355
            GKSYLERLFECE Y + DENYVTKL+RNYRCHP IL LPS LFY+GELIA KE  D  +S
Sbjct: 591  GKSYLERLFECESYDSGDENYVTKLIRNYRCHPEILHLPSTLFYEGELIACKESNDDSTS 650

Query: 356  IDAYEDILPNKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDI 535
            +    ++LP K FPVLF GIQGCDERE NNPSWFNRIEASKVVEI++KL    +L+DSDI
Sbjct: 651  LMTLTNLLPGKNFPVLFFGIQGCDEREANNPSWFNRIEASKVVEIVKKLATRGNLSDSDI 710

Query: 536  GVITPYRQQVLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVH 715
            GVITPYRQQVLKLKK L D +DMPD+KVGSVEQFQGQER+VII+STVRST++HN+FDRVH
Sbjct: 711  GVITPYRQQVLKLKKAL-DNIDMPDIKVGSVEQFQGQERKVIIVSTVRSTIKHNDFDRVH 769

Query: 716  YLGFLSNPRRFNVAITRARSLVVIIGNPHIITKDPYWDK 832
             LGFLSNPRRFNVAITRA SL++I GNPHII+KD YW+K
Sbjct: 770  CLGFLSNPRRFNVAITRAISLLIITGNPHIISKDQYWNK 808


>ref|XP_002328519.1| hypothetical protein POPTRDRAFT_294882 [Populus trichocarpa]
           gi|222838234|gb|EEE76599.1| hypothetical protein
           POPTRDRAFT_294882 [Populus trichocarpa]
          Length = 433

 Score =  441 bits (1133), Expect = e-121
 Identities = 211/277 (76%), Positives = 247/277 (89%)
 Frame = +2

Query: 2   GIKQGHFSHIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGL 181
           G+  GHFSHIFLDE+GQASEPE+MVPI+N C RETV+VLAGDP QLGPVIYSKDA+ +GL
Sbjct: 141 GVSSGHFSHIFLDESGQASEPESMVPIANFCSRETVIVLAGDPQQLGPVIYSKDAKAFGL 200

Query: 182 GKSYLERLFECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSID 361
           GKSYLERLFECE Y N DE +V KLVRNYRCH AIL+LPSKLFYKGEL+A KE+  SSI 
Sbjct: 201 GKSYLERLFECEPYRNGDEGFVIKLVRNYRCHAAILDLPSKLFYKGELLACKEDTSSSIS 260

Query: 362 AYEDILPNKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIGV 541
           +  D LPNK+FPVLF GIQG DERE NNPSWFNRIEASKVVE+I KLRAS DL+++DIGV
Sbjct: 261 SIVDFLPNKEFPVLFFGIQGFDERERNNPSWFNRIEASKVVEVINKLRASGDLDEADIGV 320

Query: 542 ITPYRQQVLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHYL 721
           ITPYRQQVLK+KK+LE+  ++ DVKVGSVEQFQGQER+VII+STVRST++HN+FDR + L
Sbjct: 321 ITPYRQQVLKIKKVLEN-WELSDVKVGSVEQFQGQEREVIIVSTVRSTIKHNDFDRTYRL 379

Query: 722 GFLSNPRRFNVAITRARSLVVIIGNPHIITKDPYWDK 832
           GFLSNP+RFNVAITRARSL++I+GNPHI+++DP W+K
Sbjct: 380 GFLSNPKRFNVAITRARSLLIIVGNPHIVSQDPCWEK 416


>ref|XP_002512265.1| ATP-dependent helicase NAM7, putative [Ricinus communis]
            gi|223548226|gb|EEF49717.1| ATP-dependent helicase NAM7,
            putative [Ricinus communis]
          Length = 850

 Score =  440 bits (1131), Expect = e-121
 Identities = 214/278 (76%), Positives = 254/278 (91%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2    GIKQGHFSHIFLDEAGQASEPETMVPISNLCRRETVVVLAGDPMQLGPVIYSKDAETYGL 181
            GIK+G+FSHIFLDE+GQASEPE+MVPIS+ CRRETVVVLAGDP QLGPV++SKDAE +GL
Sbjct: 533  GIKRGYFSHIFLDESGQASEPESMVPISSFCRRETVVVLAGDPKQLGPVVHSKDAEAFGL 592

Query: 182  GKSYLERLFECEFYHNEDENYVTKLVRNYRCHPAILELPSKLFYKGELIADKEEGDSSID 361
            GKSYL+RLFECEFYHNEDE ++TKLVRNYRCHP IL LPSKLFYKGEL+A K  GD S  
Sbjct: 593  GKSYLQRLFECEFYHNEDEAFLTKLVRNYRCHPVILHLPSKLFYKGELLACK--GDISPI 650

Query: 362  AYE-DILPNKKFPVLFIGIQGCDEREGNNPSWFNRIEASKVVEIIRKLRASADLNDSDIG 538
            +++ D+LP+K+FPVLF GIQGCDEREGNNPSWFNRIE SKVVEIIRKL+ + D+N++DIG
Sbjct: 651  SFDVDVLPSKEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEIIRKLQCT-DINETDIG 709

Query: 539  VITPYRQQVLKLKKILEDQLDMPDVKVGSVEQFQGQERQVIIISTVRSTVRHNEFDRVHY 718
            VITPYRQQVLK+KK LE   +M DVKVGSVEQFQGQE++VIIIS+VRSTV+HN+F+R + 
Sbjct: 710  VITPYRQQVLKIKKALE-TWEMSDVKVGSVEQFQGQEKEVIIISSVRSTVKHNDFERTYC 768

Query: 719  LGFLSNPRRFNVAITRARSLVVIIGNPHIITKDPYWDK 832
            LGFLSNP+RFNVA+TRARSL++I+GNPHII+KDPYW++
Sbjct: 769  LGFLSNPKRFNVAVTRARSLLIIVGNPHIISKDPYWEE 806