BLASTX nr result

ID: Coptis21_contig00020014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020014
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509898.1| conserved hypothetical protein [Ricinus comm...    68   6e-17
ref|XP_002304538.1| predicted protein [Populus trichocarpa] gi|2...    66   7e-15
ref|XP_004138801.1| PREDICTED: uncharacterized protein LOC101214...    60   3e-14
ref|NP_001242552.1| uncharacterized protein LOC100820390 [Glycin...    64   1e-13
gb|AFK37057.1| unknown [Lotus japonicus]                               65   2e-13

>ref|XP_002509898.1| conserved hypothetical protein [Ricinus communis]
           gi|223549797|gb|EEF51285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score = 67.8 bits (164), Expect(2) = 6e-17
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -3

Query: 285 AFTLNSVPPTKEEIMVGGIGRNFVSRDLLEATSLDDS 175
           AFTLNSVPPT+ EIM GGIGRNFVSRDLLEATS+DD+
Sbjct: 186 AFTLNSVPPTEGEIMAGGIGRNFVSRDLLEATSIDDA 222



 Score = 44.3 bits (103), Expect(2) = 6e-17
 Identities = 18/28 (64%), Positives = 26/28 (92%)
 Frame = -1

Query: 86  VQRIHSAEASVGHNYNLIDMKTRKLLNV 3
           + RI+S+E SVGH+YNLID++TR++LNV
Sbjct: 223 LDRIYSSEVSVGHSYNLIDIRTRRILNV 250


>ref|XP_002304538.1| predicted protein [Populus trichocarpa] gi|222841970|gb|EEE79517.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score = 66.2 bits (160), Expect(2) = 7e-15
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -3

Query: 285 AFTLNSVPPTKEEIMVGGIGRNFVSRDLLEATSLDDSFS 169
           AFTLNSVPP++ EI+ GGIGRNF+SRDLLEATS+DD+ S
Sbjct: 1   AFTLNSVPPSEAEIVAGGIGRNFISRDLLEATSIDDALS 39



 Score = 38.9 bits (89), Expect(2) = 7e-15
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -1

Query: 86  VQRIHSAEASVGHNYNLIDMKTRKLLNV 3
           + +I S+E SVGH+YNLI++ TR++LNV
Sbjct: 38  LSKIQSSEVSVGHSYNLINIGTRRILNV 65


>ref|XP_004138801.1| PREDICTED: uncharacterized protein LOC101214789 [Cucumis sativus]
           gi|449524904|ref|XP_004169461.1| PREDICTED:
           uncharacterized LOC101214789 [Cucumis sativus]
          Length = 361

 Score = 60.1 bits (144), Expect(2) = 3e-14
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -3

Query: 285 AFTLNSVPPTKEEIMVGGIGRNFVSRDLLEATSLDDS 175
           AFTLNSVPPT +EI  G IGRNF+SRDLLE+TSL+++
Sbjct: 180 AFTLNSVPPTNDEIAAGAIGRNFISRDLLESTSLENA 216



 Score = 42.7 bits (99), Expect(2) = 3e-14
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = -1

Query: 80  RIHSAEASVGHNYNLIDMKTRKLLNV 3
           RI SAE SVGH+YNLID++TR+++NV
Sbjct: 219 RIRSAEVSVGHSYNLIDVQTRRIVNV 244


>ref|NP_001242552.1| uncharacterized protein LOC100820390 [Glycine max]
           gi|255639953|gb|ACU20269.1| unknown [Glycine max]
          Length = 364

 Score = 63.9 bits (154), Expect(2) = 1e-13
 Identities = 28/39 (71%), Positives = 36/39 (92%)
 Frame = -3

Query: 285 AFTLNSVPPTKEEIMVGGIGRNFVSRDLLEATSLDDSFS 169
           AFTL+SVPP ++EI+ GGIGRNF+SRDLLEATS+DD+ +
Sbjct: 185 AFTLDSVPPAEDEIVAGGIGRNFISRDLLEATSMDDAMN 223



 Score = 37.0 bits (84), Expect(2) = 1e-13
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -1

Query: 86  VQRIHSAEASVGHNYNLIDMKTRKLLNV 3
           + RI S+E SVGH+YNL +  TR+++NV
Sbjct: 222 MNRIKSSEISVGHSYNLFETSTRRIVNV 249


>gb|AFK37057.1| unknown [Lotus japonicus]
          Length = 369

 Score = 64.7 bits (156), Expect(2) = 2e-13
 Identities = 28/37 (75%), Positives = 35/37 (94%)
 Frame = -3

Query: 285 AFTLNSVPPTKEEIMVGGIGRNFVSRDLLEATSLDDS 175
           AFTLNSVPP ++EI+ GGIGRNF+SRD+LEATS+DD+
Sbjct: 190 AFTLNSVPPVEDEIVAGGIGRNFISRDILEATSIDDA 226



 Score = 35.4 bits (80), Expect(2) = 2e-13
 Identities = 13/28 (46%), Positives = 23/28 (82%)
 Frame = -1

Query: 86  VQRIHSAEASVGHNYNLIDMKTRKLLNV 3
           +++I+S+E S GH+YNL++  TR++ NV
Sbjct: 227 MKKINSSEVSAGHSYNLMETTTRRIFNV 254


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