BLASTX nr result

ID: Coptis21_contig00020007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020007
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96927.1| hypothetical protein [Cleome spinosa]                  102   3e-20
ref|NP_186870.1| COBRA-like protein 1 [Arabidopsis thaliana] gi|...   100   2e-19
ref|XP_002884308.1| phytochelatin synthetase family protein [Ara...   100   2e-19
gb|AAM62930.1| phytochelatin synthetase-like protein [Arabidopsi...    98   8e-19
emb|CAA07251.1| putative phytochelatin synthetase [Arabidopsis t...    98   8e-19

>gb|ABD96927.1| hypothetical protein [Cleome spinosa]
          Length = 436

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/67 (65%), Positives = 55/67 (82%)
 Frame = +3

Query: 18  SVLQLPHNENQVVPPAVMCTRYMCPIRVH*HVKVSYRDYWRVKTTINNFNYV*NYSQWSL 197
           SV+Q P  +N  +PP V CT +MCPIR+H HVKV+Y++YWRVK +I NFNYV NYSQW++
Sbjct: 254 SVIQSP-GKNSYMPPLVQCTNHMCPIRIHWHVKVNYKEYWRVKISITNFNYVMNYSQWNV 312

Query: 198 VVQHPNF 218
           VVQHPNF
Sbjct: 313 VVQHPNF 319


>ref|NP_186870.1| COBRA-like protein 1 [Arabidopsis thaliana]
           gi|34222657|sp|Q9SRT7.1|COBL1_ARATH RecName:
           Full=COBRA-like protein 1; Flags: Precursor
           gi|6041808|gb|AAF02128.1|AC009755_21 unknown protein
           [Arabidopsis thaliana] gi|26452135|dbj|BAC43156.1|
           GPI-anchored protein [Arabidopsis thaliana]
           gi|28951027|gb|AAO63437.1| At3g02210 [Arabidopsis
           thaliana] gi|332640258|gb|AEE73779.1| COBRA-like protein
           1 [Arabidopsis thaliana]
          Length = 452

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 53/67 (79%)
 Frame = +3

Query: 18  SVLQLPHNENQVVPPAVMCTRYMCPIRVH*HVKVSYRDYWRVKTTINNFNYV*NYSQWSL 197
           SV+  P  +N  +PP V CT++MCP+R+H HVKV+Y+ YWRVK TI NFNY  NYSQW+L
Sbjct: 271 SVIPNP-GKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNL 329

Query: 198 VVQHPNF 218
           VVQHPNF
Sbjct: 330 VVQHPNF 336


>ref|XP_002884308.1| phytochelatin synthetase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330148|gb|EFH60567.1| phytochelatin
           synthetase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 53/67 (79%)
 Frame = +3

Query: 18  SVLQLPHNENQVVPPAVMCTRYMCPIRVH*HVKVSYRDYWRVKTTINNFNYV*NYSQWSL 197
           SV+  P  +N  +PP V CT++MCP+R+H HVKV+Y+ YWRVK TI NFNY  NYSQW+L
Sbjct: 270 SVIPNP-GKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNL 328

Query: 198 VVQHPNF 218
           VVQHPNF
Sbjct: 329 VVQHPNF 335


>gb|AAM62930.1| phytochelatin synthetase-like protein [Arabidopsis thaliana]
          Length = 456

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = +3

Query: 18  SVLQLPHNENQVVPPAVMCTRYMCPIRVH*HVKVSYRDYWRVKTTINNFNYV*NYSQWSL 197
           SV+  P  +  V+PP V CTR+MCPIRVH HVK +Y++YWRVK TI NFNY  NY+QW+L
Sbjct: 275 SVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNL 334

Query: 198 VVQHPN 215
           V QHPN
Sbjct: 335 VAQHPN 340


>emb|CAA07251.1| putative phytochelatin synthetase [Arabidopsis thaliana]
           gi|10177315|dbj|BAB10641.1| phytochelatin synthetase
           [Arabidopsis thaliana]
          Length = 362

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = +3

Query: 18  SVLQLPHNENQVVPPAVMCTRYMCPIRVH*HVKVSYRDYWRVKTTINNFNYV*NYSQWSL 197
           SV+  P  +  V+PP V CTR+MCPIRVH HVK +Y++YWRVK TI NFNY  NY+QW+L
Sbjct: 181 SVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNL 240

Query: 198 VVQHPN 215
           V QHPN
Sbjct: 241 VAQHPN 246


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