BLASTX nr result

ID: Coptis21_contig00019994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019994
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333242.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_004140121.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   194   1e-47
ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_002529472.1| Glucan endo-1,3-beta-glucosidase precursor, ...   191   7e-47
ref|XP_002316783.1| predicted protein [Populus trichocarpa] gi|2...   191   9e-47

>ref|XP_002333242.1| predicted protein [Populus trichocarpa]
           gi|224129034|ref|XP_002320484.1| predicted protein
           [Populus trichocarpa] gi|118480997|gb|ABK92452.1|
           unknown [Populus trichocarpa]
           gi|222835778|gb|EEE74213.1| predicted protein [Populus
           trichocarpa] gi|222861257|gb|EEE98799.1| predicted
           protein [Populus trichocarpa]
          Length = 470

 Score =  194 bits (494), Expect = 8e-48
 Identities = 93/143 (65%), Positives = 107/143 (74%), Gaps = 6/143 (4%)
 Frame = -1

Query: 610 NYGLFYPNEEKVYEIPFTPAQLKKWKS---KPVNRGGSQKGPANKGAS---SGGTWCVAN 449
           NYGLFYP+++KVY+IPFT   LK +K+    PV+ G     P   G S   +G TWCVAN
Sbjct: 327 NYGLFYPDQQKVYDIPFTVEGLKNYKAPSRSPVSGGQQVSAPVRGGVSKSTTGNTWCVAN 386

Query: 448 EKIRKEKLQAALDFACGEGGADCRQIQPGSTCYDPNTVEAHASFAFNSYYQRNGRAMGSC 269
               KEKLQAALDFACGEGGADCR IQP +TCY PNT+ AH+SFAFNSYYQ+ GR MG C
Sbjct: 387 PDAGKEKLQAALDFACGEGGADCRPIQPDATCYSPNTLVAHSSFAFNSYYQKKGRGMGDC 446

Query: 268 YFGGAAFVVTQLPKYGNCKFTTG 200
           YFGGAAFVVTQ PK+G C+F TG
Sbjct: 447 YFGGAAFVVTQEPKFGVCEFPTG 469


>ref|XP_004140121.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13-like isoform 2
           [Cucumis sativus] gi|449481150|ref|XP_004156096.1|
           PREDICTED: glucan endo-1,3-beta-glucosidase 13-like
           isoform 2 [Cucumis sativus]
          Length = 476

 Score =  194 bits (492), Expect = 1e-47
 Identities = 91/147 (61%), Positives = 112/147 (76%), Gaps = 10/147 (6%)
 Frame = -1

Query: 610 NYGLFYPNEEKVYEIPFTPAQLKKWKSKP----VNRGGSQKGPANKG------ASSGGTW 461
           NYGLFYPNEEKVY+IPFT   LK ++ KP    V+ G +   P   G      + +G TW
Sbjct: 329 NYGLFYPNEEKVYDIPFTTEGLKDFEDKPSPKPVSGGNAPTAPPASGDGGVSKSQTGNTW 388

Query: 460 CVANEKIRKEKLQAALDFACGEGGADCRQIQPGSTCYDPNTVEAHASFAFNSYYQRNGRA 281
           CVA+ +  KEKLQ+ LD+ACGEGGADCR IQ G+TCY+PNT+EAHAS+AFNSYYQ+N R 
Sbjct: 389 CVASGEAGKEKLQSGLDYACGEGGADCRPIQVGATCYNPNTLEAHASYAFNSYYQKNSRK 448

Query: 280 MGSCYFGGAAFVVTQLPKYGNCKFTTG 200
           +G+CYFGGAA+VVTQ PKYG+C+F TG
Sbjct: 449 VGTCYFGGAAYVVTQPPKYGSCEFPTG 475


>ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|222844587|gb|EEE82134.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  194 bits (492), Expect = 1e-47
 Identities = 93/143 (65%), Positives = 109/143 (76%), Gaps = 6/143 (4%)
 Frame = -1

Query: 610 NYGLFYPNEEKVYEIPFTPAQLKKWK--SKPVNRGGSQ-KGPANKGAS---SGGTWCVAN 449
           NYGLFYP+E+KVY+IPFT   LK +K  ++  + G  Q   P N G S   +G TWCVAN
Sbjct: 327 NYGLFYPDEQKVYDIPFTVEGLKSYKDSNRSSDTGSHQVAAPVNGGVSKSTTGKTWCVAN 386

Query: 448 EKIRKEKLQAALDFACGEGGADCRQIQPGSTCYDPNTVEAHASFAFNSYYQRNGRAMGSC 269
               K+KLQA LDFACGEGGADCR IQPG+TCYDPNT+ AH+SFAFNSYYQ+ GR MG C
Sbjct: 387 PDAGKQKLQAGLDFACGEGGADCRPIQPGATCYDPNTLVAHSSFAFNSYYQKQGRGMGDC 446

Query: 268 YFGGAAFVVTQLPKYGNCKFTTG 200
           YFGGAA+VVTQ PK+G C+F TG
Sbjct: 447 YFGGAAYVVTQEPKFGQCEFPTG 469


>ref|XP_002529472.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223531088|gb|EEF32938.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 472

 Score =  191 bits (486), Expect = 7e-47
 Identities = 93/143 (65%), Positives = 107/143 (74%), Gaps = 6/143 (4%)
 Frame = -1

Query: 610 NYGLFYPNEEKVYEIPFTPAQLKKWKSKPVNRGGSQKGPANKGASS------GGTWCVAN 449
           NYGLFYPNEEKVY+I  T  +L    S P N+  SQ   A+ G         G TWCVAN
Sbjct: 333 NYGLFYPNEEKVYDISLTQKEL----STPGNQNKSQAPQASGGGGEVSKTAVGQTWCVAN 388

Query: 448 EKIRKEKLQAALDFACGEGGADCRQIQPGSTCYDPNTVEAHASFAFNSYYQRNGRAMGSC 269
            KI KEKLQA +D+ACGEGGADCR IQ G+TCY+PNTVEAHAS+AFNSYYQ+  RA G+C
Sbjct: 389 GKIGKEKLQAGIDYACGEGGADCRPIQQGATCYNPNTVEAHASYAFNSYYQKKSRAAGTC 448

Query: 268 YFGGAAFVVTQLPKYGNCKFTTG 200
           YFGGAA+VVTQ P+YGNC+F TG
Sbjct: 449 YFGGAAYVVTQPPRYGNCEFPTG 471


>ref|XP_002316783.1| predicted protein [Populus trichocarpa] gi|222859848|gb|EEE97395.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  191 bits (485), Expect = 9e-47
 Identities = 90/143 (62%), Positives = 105/143 (73%), Gaps = 6/143 (4%)
 Frame = -1

Query: 610 NYGLFYPNEEKVYEIPFTPAQLKKWKSKPVNRGGSQKGPANKG------ASSGGTWCVAN 449
           NYGLFYPNE++VY++PFT  QL   +S PVN+  S       G      +S G TWCVAN
Sbjct: 306 NYGLFYPNEKRVYDVPFTLEQLGNGQSMPVNKSNSPAPSVQSGGDVSTTSSVGQTWCVAN 365

Query: 448 EKIRKEKLQAALDFACGEGGADCRQIQPGSTCYDPNTVEAHASFAFNSYYQRNGRAMGSC 269
                EKLQA LD+ACGEGGADCR IQ GSTCY+PNTVEAHAS+AFNSYYQ+  R  G+C
Sbjct: 366 GNAGAEKLQAGLDYACGEGGADCRPIQTGSTCYNPNTVEAHASYAFNSYYQKKARGAGTC 425

Query: 268 YFGGAAFVVTQLPKYGNCKFTTG 200
            FGGAA+VVTQ P++GNCKF TG
Sbjct: 426 DFGGAAYVVTQQPRFGNCKFPTG 448


Top