BLASTX nr result

ID: Coptis21_contig00019986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019986
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002307880.1| predicted protein [Populus trichocarpa] gi|222853856|gb|EEE91403.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
 Frame = +3

Query: 3   AFNVASEKFCEFESPPFQQEQGRLSGALRVIEELLCFIDMKEFDELEMWVMKDYGVQGSW 182
           +++++ E+F E   P        L   + V + LL    + ++DE  +W MK+YGV  SW
Sbjct: 241 SYDMSKEEFKEIPQPIVNYND-ELHMEVSVFDGLLSTFYLSKYDEAHIWSMKEYGVTDSW 299

Query: 183 AKE--YKFNAQVLNYTHHNYMCGQNVVKLKNGEFLVKYGPKDFGYYDAKQGTCQPVLLPI 356
                 K   +V NY   NY+  + +  LKNGE L++ G K    +D K+ + + ++ PI
Sbjct: 300 ELRVVIKLPWRVENY---NYIFLKPLTILKNGEILIEAGEKARILHDPKKDSYR-IINPI 355

Query: 357 TTDDCEYGLPHVFL----LGSLFSP 419
                  G+P  FL    +GSL SP
Sbjct: 356 R------GVPRRFLVTPIVGSLVSP 374


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