BLASTX nr result

ID: Coptis21_contig00019968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019968
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268004.1| PREDICTED: ethylene-responsive transcription...   155   3e-36
ref|XP_002518093.1| hypothetical protein RCOM_1019500 [Ricinus c...   150   8e-35
ref|XP_002323984.1| AP2/ERF domain-containing transcription fact...   135   3e-30
emb|CBI17312.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_004139008.1| PREDICTED: ethylene-responsive transcription...   127   1e-27

>ref|XP_002268004.1| PREDICTED: ethylene-responsive transcription factor ERF062 [Vitis
           vinifera] gi|147863479|emb|CAN84054.1| hypothetical
           protein VITISV_015748 [Vitis vinifera]
          Length = 442

 Score =  155 bits (392), Expect = 3e-36
 Identities = 87/177 (49%), Positives = 101/177 (57%), Gaps = 31/177 (17%)
 Frame = -2

Query: 438 VPVNFIDMFPAFSGSQVSNSPS--------RIPNLNLFLEEPEPNVIGPVAHNAEQ---- 295
           +PVNF++ FP  + +QVS  PS          PNL LFL+EP   VI P    A      
Sbjct: 124 IPVNFLESFPELTPAQVSGPPSPSSSSTASNFPNLTLFLQEPSTVVIDPSTQIANSLGRN 183

Query: 294 -----------------HQVQPLLGLDWFSINNKLVGSPAKGSRDYCLGVNKTQVMKYSG 166
                             Q Q L G +W  IN  L   P+KG  DY L   KTQ MKY+G
Sbjct: 184 EKCEPMSSCPLFPTPQLSQSQHLPGFEWLKINQSLANHPSKGLSDYWLSTTKTQPMKYTG 243

Query: 165 SKNQENQQKTW--ASTSSQGKLFRGVRQRHWGKWVAEIRLPRNRSRVWLGTFDTAEE 1
            +   +QQKT   +S SS GKLFRGVRQRHWGKWVAEIRLPRNR+RVWLGTFDTA+E
Sbjct: 244 RRMLNHQQKTSLSSSASSPGKLFRGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAQE 300


>ref|XP_002518093.1| hypothetical protein RCOM_1019500 [Ricinus communis]
           gi|223542689|gb|EEF44226.1| hypothetical protein
           RCOM_1019500 [Ricinus communis]
          Length = 466

 Score =  150 bits (380), Expect = 8e-35
 Identities = 88/191 (46%), Positives = 112/191 (58%), Gaps = 41/191 (21%)
 Frame = -2

Query: 450 KGSSVPVNFIDMFPAFSGSQVSN----SPSRIPNLNLFLEEP------------------ 337
           + S++PVNF++ FP  + +QVS+    SPS+ PNL LFL+EP                  
Sbjct: 115 ESSNIPVNFLESFPKLNQTQVSDHQPSSPSKFPNLTLFLQEPSLLLDPSSKQKIDSLSHE 174

Query: 336 -----EPNVIGPVAHNAEQHQVQPLLGL----DWFSINNKLVGSPAKGSRDYCLGVNKTQ 184
                EP +  P + +    Q++ + G      W  IN  L   P KG  DY LG  KTQ
Sbjct: 175 NRTMFEPMLRFP-SSSVSVSQLEQIYGQTSQDQWLKINQTLTYYPTKGFNDYWLGTTKTQ 233

Query: 183 VMKYSGSKNQENQQKT----------WASTSSQGKLFRGVRQRHWGKWVAEIRLPRNRSR 34
            MK++G + Q +QQK+           +S+SSQGKLFRGVRQRHWGKWVAEIRLPRNR+R
Sbjct: 234 PMKHTGRRVQNHQQKSPLPSMAAAVSSSSSSSQGKLFRGVRQRHWGKWVAEIRLPRNRTR 293

Query: 33  VWLGTFDTAEE 1
           VWLGTFDTAEE
Sbjct: 294 VWLGTFDTAEE 304


>ref|XP_002323984.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372112|gb|ABQ62987.1| RAP2-like
           protein [Populus trichocarpa]
           gi|222866986|gb|EEF04117.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 456

 Score =  135 bits (341), Expect = 3e-30
 Identities = 83/186 (44%), Positives = 100/186 (53%), Gaps = 36/186 (19%)
 Frame = -2

Query: 450 KGSSVPVNFIDMFPAFSG-SQVSNSPS-----RIPNLNLFLEEP--------EPNVIGPV 313
           K SS+PVNF++ FP     +QV   PS     + PNL LF +EP           V+ P 
Sbjct: 128 KESSIPVNFLEPFPTLKNQAQVPEPPSPSSLSKSPNLTLFSQEPAAASLLHPSKRVLDPP 187

Query: 312 AHNAEQHQVQPLLGL--------------------DWFSINNKLVGSPAKGSRDYCLGVN 193
               +  + +P + L                    +W  IN  L     KG  DY L   
Sbjct: 188 G---KDQRCEPAMSLFPNTSFSMPQLGQVHCQPSNEWLKINQTLANYSTKGFNDYWLSTT 244

Query: 192 KTQVMKYSGSKNQENQQKTWASTSSQ--GKLFRGVRQRHWGKWVAEIRLPRNRSRVWLGT 19
           KTQ MKYSG K Q + QK   S++S   GKLFRGVRQRHWGKWVAEIRLPRNR+RVWLGT
Sbjct: 245 KTQPMKYSGRKLQNHHQKPSFSSASTSPGKLFRGVRQRHWGKWVAEIRLPRNRTRVWLGT 304

Query: 18  FDTAEE 1
           FDTAE+
Sbjct: 305 FDTAED 310


>emb|CBI17312.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/134 (53%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
 Frame = -2

Query: 396 SQVSNSPSRIPNLNLFLEEPEPNVIGPVAHNAEQHQVQPLLGLDWFSINNKLVGSPAKGS 217
           +Q++NS  R        E+ EP    P+    +  Q Q L G +W  IN  L   P+KG 
Sbjct: 194 TQIANSLGRN-------EKCEPMSSCPLFPTPQLSQSQHLPGFEWLKINQSLANHPSKGL 246

Query: 216 RDYCLGVNKTQVMKYSGSKNQENQQKTW--ASTSSQGKLFRGVRQRHWGKWVAEIRLPRN 43
            DY L   KTQ MKY+G +   +QQKT   +S SS GKLFRGVRQRHWGKWVAEIRLPRN
Sbjct: 247 SDYWLSTTKTQPMKYTGRRMLNHQQKTSLSSSASSPGKLFRGVRQRHWGKWVAEIRLPRN 306

Query: 42  RSRVWLGTFDTAEE 1
           R+RVWLGTFDTA+E
Sbjct: 307 RTRVWLGTFDTAQE 320


>ref|XP_004139008.1| PREDICTED: ethylene-responsive transcription factor ERF062-like
           [Cucumis sativus] gi|449534280|ref|XP_004174093.1|
           PREDICTED: ethylene-responsive transcription factor
           ERF062-like [Cucumis sativus]
          Length = 400

 Score =  127 bits (318), Expect = 1e-27
 Identities = 75/156 (48%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
 Frame = -2

Query: 438 VPVNFIDMFPAFSGSQVSNSP----SRIPNLNLFLEEPEPNVIGPVAHNAEQHQVQPLLG 271
           VP+NF++ FP      +S SP    SRI + NL L   EP ++ P   N    Q+    G
Sbjct: 115 VPLNFLETFPKQESESLSPSPPLFQSRIDSTNLTLFLQEPTIVDPSPQNP--FQIHSQTG 172

Query: 270 LDWFSINNK------LVGSPAKGSRDYCLGVNKTQVMKYSGSKNQENQQKTWASTSSQGK 109
           L W            +V   A    D+ LG  KTQ MK  G K  +  QKT   +S+ GK
Sbjct: 173 LQWLKNTQNQNRSAAIVAGAANNYSDFWLGATKTQPMKQIGRK--QGNQKT--ESSAVGK 228

Query: 108 LFRGVRQRHWGKWVAEIRLPRNRSRVWLGTFDTAEE 1
           LFRGVRQRHWGKWVAEIRLPRNR+RVWLGTFDTA E
Sbjct: 229 LFRGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAVE 264


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