BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019955
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   272   3e-71
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   272   3e-71
emb|CBI35164.3| unnamed protein product [Vitis vinifera]              268   5e-70
ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   268   5e-70
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   254   6e-66

>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Vitis vinifera]
          Length = 731

 Score =  272 bits (696), Expect = 3e-71
 Identities = 129/167 (77%), Positives = 148/167 (88%)
 Frame = -2

Query: 595  NVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEVNGSLHEFIMGDRSHPRTEEI 416
            NV+MSNIYAAA+RW+D AGVRKTMK  G+KK PG S IEVNG++HEF+MGD+SHP+   I
Sbjct: 565  NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 624

Query: 415  FEMLTEMTKKLKQAGYVADTSVVLLNVDDEEKEIALTYHSERLAIAFGLISTAPSTPIRI 236
             EML EM +KL +AGYV DTS VLLN+D+EEKE ALTYHSE+LA+AFGLISTAPSTPIRI
Sbjct: 625  NEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRI 684

Query: 235  VKNLRVCDDCHSATKLLSKIFGRVIIVRDRNRFHHFSEGSCSCRDFW 95
            VKNLRVC+DCH+ATKLLSKI+GRVIIVRDRNRFHHF EG CSC D+W
Sbjct: 685  VKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  272 bits (696), Expect = 3e-71
 Identities = 129/167 (77%), Positives = 148/167 (88%)
 Frame = -2

Query: 595  NVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEVNGSLHEFIMGDRSHPRTEEI 416
            NV+MSNIYAAA+RW+D AGVRKTMK  G+KK PG S IEVNG++HEF+MGD+SHP+   I
Sbjct: 605  NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 664

Query: 415  FEMLTEMTKKLKQAGYVADTSVVLLNVDDEEKEIALTYHSERLAIAFGLISTAPSTPIRI 236
             EML EM +KL +AGYV DTS VLLN+D+EEKE ALTYHSE+LA+AFGLISTAPSTPIRI
Sbjct: 665  NEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRI 724

Query: 235  VKNLRVCDDCHSATKLLSKIFGRVIIVRDRNRFHHFSEGSCSCRDFW 95
            VKNLRVC+DCH+ATKLLSKI+GRVIIVRDRNRFHHF EG CSC D+W
Sbjct: 725  VKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771


>emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  268 bits (685), Expect = 5e-70
 Identities = 128/166 (77%), Positives = 147/166 (88%)
 Frame = -2

Query: 595 NVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEVNGSLHEFIMGDRSHPRTEEI 416
           NV+MSNIYAAA+RW+D AGVRKTMK  G+KK PG S IEVNG++HEF+MGD+SHP+   I
Sbjct: 479 NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 538

Query: 415 FEMLTEMTKKLKQAGYVADTSVVLLNVDDEEKEIALTYHSERLAIAFGLISTAPSTPIRI 236
            EML EM +KL +AGYV DTS VLLN+D+EEKE ALTYHSE+LA+AFGLISTAPSTPIRI
Sbjct: 539 NEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRI 598

Query: 235 VKNLRVCDDCHSATKLLSKIFGRVIIVRDRNRFHHFSEGSCSCRDF 98
           VKNLRVC+DCH+ATKLLSKI+GRVIIVRDRNRFHHF EG CSC D+
Sbjct: 599 VKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644


>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
            predicted protein [Populus trichocarpa]
          Length = 705

 Score =  268 bits (685), Expect = 5e-70
 Identities = 126/166 (75%), Positives = 147/166 (88%)
 Frame = -2

Query: 592  VMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEVNGSLHEFIMGDRSHPRTEEIF 413
            V+MSNIYAAA+RWNDVAG+RK +KDTGIKK PG+SSIEVNG +H+F MGD +HP  E+I 
Sbjct: 540  VLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKIS 599

Query: 412  EMLTEMTKKLKQAGYVADTSVVLLNVDDEEKEIALTYHSERLAIAFGLISTAPSTPIRIV 233
            EML EM+KKLK+AGY+ DTSVVL N+D+EEKE AL YHSE+LA+AFGLISTAP TPIR+V
Sbjct: 600  EMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVV 659

Query: 232  KNLRVCDDCHSATKLLSKIFGRVIIVRDRNRFHHFSEGSCSCRDFW 95
            KNLR+CDDCH+ TKLLSKI+ RVIIVRDRNRFHHF EGSCSC  +W
Sbjct: 660  KNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Glycine max]
          Length = 801

 Score =  254 bits (650), Expect = 6e-66
 Identities = 119/167 (71%), Positives = 140/167 (83%)
 Frame = -2

Query: 595  NVMMSNIYAAAHRWNDVAGVRKTMKDTGIKKAPGISSIEVNGSLHEFIMGDRSHPRTEEI 416
            NV+MSNIYA+A+RW DVA +R+ MKD GI K PG+SSIEVNG LHEFIMGDR HP  +++
Sbjct: 635  NVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKV 694

Query: 415  FEMLTEMTKKLKQAGYVADTSVVLLNVDDEEKEIALTYHSERLAIAFGLISTAPSTPIRI 236
            +EM+ EM +KL+ AGY  D S VL N+D E+K  AL YHSE+LA+A+GLISTAP  PIRI
Sbjct: 695  YEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRI 754

Query: 235  VKNLRVCDDCHSATKLLSKIFGRVIIVRDRNRFHHFSEGSCSCRDFW 95
            VKNLRVCDDCH+ATKLLSKI+GR IIVRDRNRFHHF EGSCSC D+W
Sbjct: 755  VKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801