BLASTX nr result

ID: Coptis21_contig00019954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019954
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38230.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002270361.1| PREDICTED: GATA transcription factor 24 [Vit...   129   3e-28
ref|XP_002316441.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002883290.1| hypothetical protein ARALYDRAFT_479637 [Arab...   127   1e-27
gb|AAM61663.1| flowering protein CONSTANS, putative [Arabidopsis...   126   2e-27

>emb|CBI38230.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/89 (69%), Positives = 68/89 (76%), Gaps = 6/89 (6%)
 Frame = -2

Query: 251 VRKEVALRMQRKKGQFTSSKPTPEELAS------RGIENGGDDSPEILCTHCGISSKSTP 90
           VRKEVALRMQRKKGQFTSSK + +E+              G D PEILCTHCG SSK+TP
Sbjct: 119 VRKEVALRMQRKKGQFTSSKASSDEVGGGASSDWNAAHGSGQDEPEILCTHCGTSSKTTP 178

Query: 89  MMRRGPAGPRTLCNACGLMWANKGTLKDL 3
           MMRRGPAGPR+LCNACGL WANKG L+DL
Sbjct: 179 MMRRGPAGPRSLCNACGLKWANKGVLRDL 207


>ref|XP_002270361.1| PREDICTED: GATA transcription factor 24 [Vitis vinifera]
          Length = 302

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/89 (69%), Positives = 68/89 (76%), Gaps = 6/89 (6%)
 Frame = -2

Query: 251 VRKEVALRMQRKKGQFTSSKPTPEELAS------RGIENGGDDSPEILCTHCGISSKSTP 90
           VRKEVALRMQRKKGQFTSSK + +E+              G D PEILCTHCG SSK+TP
Sbjct: 167 VRKEVALRMQRKKGQFTSSKASSDEVGGGASSDWNAAHGSGQDEPEILCTHCGTSSKTTP 226

Query: 89  MMRRGPAGPRTLCNACGLMWANKGTLKDL 3
           MMRRGPAGPR+LCNACGL WANKG L+DL
Sbjct: 227 MMRRGPAGPRSLCNACGLKWANKGVLRDL 255


>ref|XP_002316441.1| predicted protein [Populus trichocarpa] gi|222865481|gb|EEF02612.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  127 bits (320), Expect = 7e-28
 Identities = 65/93 (69%), Positives = 70/93 (75%), Gaps = 10/93 (10%)
 Frame = -2

Query: 251 VRKEVALRMQRKKGQFTSSKPTPEELASRGI-----ENGGDDS-----PEILCTHCGISS 102
           VRKEVALRMQR KGQFTSSKP  ++ AS        E+GG DS      E +C HCGIS 
Sbjct: 166 VRKEVALRMQRNKGQFTSSKPNHDDSASAATSWGSNESGGSDSNGSQHQEAICRHCGISE 225

Query: 101 KSTPMMRRGPAGPRTLCNACGLMWANKGTLKDL 3
           KSTPMMRRGP GPRTLCNACGLMWANKGTL+DL
Sbjct: 226 KSTPMMRRGPEGPRTLCNACGLMWANKGTLRDL 258


>ref|XP_002883290.1| hypothetical protein ARALYDRAFT_479637 [Arabidopsis lyrata subsp.
           lyrata] gi|297329130|gb|EFH59549.1| hypothetical protein
           ARALYDRAFT_479637 [Arabidopsis lyrata subsp. lyrata]
          Length = 297

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/93 (66%), Positives = 71/93 (76%), Gaps = 10/93 (10%)
 Frame = -2

Query: 251 VRKEVALRMQRKKGQFTSSKPTPEELASRGIENGGDDS----------PEILCTHCGISS 102
           VRKEVALRMQRKKGQFTS+K + ++  S G + G + +          PE+LC HCGIS 
Sbjct: 167 VRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQNWAIEGTETQKPEVLCRHCGISE 226

Query: 101 KSTPMMRRGPAGPRTLCNACGLMWANKGTLKDL 3
           KSTPMMRRGP GPRTLCNACGLMWANKGTL+DL
Sbjct: 227 KSTPMMRRGPDGPRTLCNACGLMWANKGTLRDL 259


>gb|AAM61663.1| flowering protein CONSTANS, putative [Arabidopsis thaliana]
          Length = 297

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/93 (66%), Positives = 70/93 (75%), Gaps = 10/93 (10%)
 Frame = -2

Query: 251 VRKEVALRMQRKKGQFTSSKPTPEELASRGIENGGDDS----------PEILCTHCGISS 102
           VRKEVALRMQRKKGQFTS+K + ++  S G + G + S          PE+LC HCG S 
Sbjct: 167 VRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSE 226

Query: 101 KSTPMMRRGPAGPRTLCNACGLMWANKGTLKDL 3
           KSTPMMRRGP GPRTLCNACGLMWANKGTL+DL
Sbjct: 227 KSTPMMRRGPDGPRTLCNACGLMWANKGTLRDL 259


Top