BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019946
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27495.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40

>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/171 (53%), Positives = 118/171 (69%)
 Frame = +1

Query: 1   RKFSTTEVLLGSFESEDGLAVFAFETAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYC 180
           RKF  TE LL  F   D +A+  F +AM GYNKLHM+SSTI V++RMK AGV+ ++  Y 
Sbjct: 104 RKFRITESLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYY 163

Query: 181 QIMEAYSKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGLEALELFREM 360
           +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R  EALE FR+M
Sbjct: 164 RIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDM 223

Query: 361 TGKGIVENXXXXXXXXXXXXXTGEVKVAEQLFAEAKEKNMVKDPALFLKLV 513
           T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLV
Sbjct: 224 TKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 274


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/171 (53%), Positives = 118/171 (69%)
 Frame = +1

Query: 1   RKFSTTEVLLGSFESEDGLAVFAFETAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYC 180
           RKF  TE LL  F   D +A+  F +AM GYNKLHM+SSTI V++RMK AGV+ ++  Y 
Sbjct: 166 RKFRITESLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYY 225

Query: 181 QIMEAYSKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGLEALELFREM 360
           +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R  EALE FR+M
Sbjct: 226 RIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDM 285

Query: 361 TGKGIVENXXXXXXXXXXXXXTGEVKVAEQLFAEAKEKNMVKDPALFLKLV 513
           T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLV
Sbjct: 286 TKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 336


>ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  171 bits (432), Expect = 7e-41
 Identities = 85/171 (49%), Positives = 115/171 (67%)
 Frame = +1

Query: 1   RKFSTTEVLLGSFESEDGLAVFAFETAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYC 180
           RKF   + LL  FE   G+A+ AFE AM+GYNKLHM+ STIMVF R+K A +  D+GCYC
Sbjct: 167 RKFKVVKSLLEVFERNSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYC 226

Query: 181 QIMEAYSKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGLEALELFREM 360
           ++MEAY K+GD+++V+ LF E  S+    +  ST+I+ ILC+SL KS R  E+LE FR+M
Sbjct: 227 RVMEAYLKLGDSERVMELFNEVESRISDSTPFSTKIYGILCESLAKSGRVFESLEFFRDM 286

Query: 361 TGKGIVENXXXXXXXXXXXXXTGEVKVAEQLFAEAKEKNMVKDPALFLKLV 513
             KGI E+               EVK+AE L+ EAK K +++DPA+FLKL+
Sbjct: 287 RKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLI 337


>ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  171 bits (432), Expect = 7e-41
 Identities = 85/171 (49%), Positives = 116/171 (67%)
 Frame = +1

Query: 1   RKFSTTEVLLGSFESEDGLAVFAFETAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYC 180
           RKF   + LL  FE + G+A+ AFE AM+GYNKLHM+ STIMVF R+K A +  D+GCYC
Sbjct: 167 RKFKVVKSLLEVFERDSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYC 226

Query: 181 QIMEAYSKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGLEALELFREM 360
           ++MEAY K+GD+++V+ LF E  S+    +  ST+I+ ILC+SL KS R  E+LE FR+M
Sbjct: 227 RVMEAYLKLGDSERVMELFNEVESRISVSTPFSTKIYGILCESLAKSGRVFESLEFFRDM 286

Query: 361 TGKGIVENXXXXXXXXXXXXXTGEVKVAEQLFAEAKEKNMVKDPALFLKLV 513
             KGI E+               EVK+AE L+ EAK K +++DPA+FLKL+
Sbjct: 287 RKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLI 337


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score =  168 bits (425), Expect = 5e-40
 Identities = 90/171 (52%), Positives = 117/171 (68%)
 Frame = +1

Query: 1   RKFSTTEVLLGSFESEDGLAVFAFETAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYC 180
           RKF  TE LL  F   D +A+    +AM GYNKLHM+SSTI V++RMK AGV+ ++  Y 
Sbjct: 167 RKFRITESLLEVFSYNDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYY 226

Query: 181 QIMEAYSKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGLEALELFREM 360
           +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R  EALE FR+M
Sbjct: 227 RIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDM 286

Query: 361 TGKGIVENXXXXXXXXXXXXXTGEVKVAEQLFAEAKEKNMVKDPALFLKLV 513
           T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLV
Sbjct: 287 TKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 337