BLASTX nr result

ID: Coptis21_contig00019945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019945
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330703.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_002534538.1| transcription factor, putative [Ricinus comm...   163   7e-38
ref|XP_004152130.1| PREDICTED: transcription factor bHLH113-like...   159   2e-36
ref|XP_002325599.1| predicted protein [Populus trichocarpa] gi|2...   158   3e-36
ref|XP_002273925.1| PREDICTED: transcription factor bHLH113 [Vit...   154   5e-35

>ref|XP_002330703.1| predicted protein [Populus trichocarpa] gi|222872307|gb|EEF09438.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score =  169 bits (428), Expect = 1e-39
 Identities = 82/132 (62%), Positives = 98/132 (74%)
 Frame = +2

Query: 212 ENKRGPASLDHCSVICDTMKRHKTEVLISRKERKEMMGDRIATLQQLVSPYGKTDTASVL 391
           ENKR P S+DH S+     KRHK +  IS KERKE +G+RI  LQQLVSPYGKTDTASVL
Sbjct: 2   ENKRSPCSVDHASLTSLATKRHKADFSISTKERKEKLGERIVALQQLVSPYGKTDTASVL 61

Query: 392 FEAMEYIRFLHDQVKALSAPYLVGAPTVEIPEQEHYNLRGQGLCLVPISCSLRVVGTNGA 571
            EAMEYIRFLH+QV+ LSAPYL G  T ++ E   Y+LR +GLCLVP SC+  +  +NGA
Sbjct: 62  MEAMEYIRFLHEQVQVLSAPYLQGTSTAQMQELGQYSLRNKGLCLVPTSCTAGIARSNGA 121

Query: 572 DIWASMKGSSPR 607
           DIWA +K  SP+
Sbjct: 122 DIWAPIKSPSPK 133


>ref|XP_002534538.1| transcription factor, putative [Ricinus communis]
           gi|223525089|gb|EEF27845.1| transcription factor,
           putative [Ricinus communis]
          Length = 119

 Score =  163 bits (413), Expect = 7e-38
 Identities = 78/113 (69%), Positives = 94/113 (83%)
 Frame = +2

Query: 269 KRHKTEVLISRKERKEMMGDRIATLQQLVSPYGKTDTASVLFEAMEYIRFLHDQVKALSA 448
           KRHK ++ IS KERKE +G+RI  LQQLVSPYGKTDTASVL EAMEYIRFLH+QVK LSA
Sbjct: 2   KRHKADLSISTKERKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIRFLHEQVKVLSA 61

Query: 449 PYLVGAPTVEIPEQEHYNLRGQGLCLVPISCSLRVVGTNGADIWASMKGSSPR 607
           PYL GAPT ++ E E Y+LR +GLCLVPI+C++ V  +NGADIWA +K +SP+
Sbjct: 62  PYLQGAPTTQMQELEQYSLRNRGLCLVPITCTIGVDRSNGADIWAPIKNTSPK 114


>ref|XP_004152130.1| PREDICTED: transcription factor bHLH113-like [Cucumis sativus]
           gi|449484720|ref|XP_004156961.1| PREDICTED:
           transcription factor bHLH113-like [Cucumis sativus]
          Length = 167

 Score =  159 bits (401), Expect = 2e-36
 Identities = 84/140 (60%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
 Frame = +2

Query: 194 EETKMTENKRGPASLDHCSVICDTMKRHKTEVLISRKERKEMMGDRIATLQQLVSPYGKT 373
           E   M E KR   S+D  ++   T KRHKT+  IS KERK+ +G+RI  LQQLVSPYGKT
Sbjct: 19  EVETMMEQKRTLCSVDESALTSLTPKRHKTDFSISSKERKDKLGERIMALQQLVSPYGKT 78

Query: 374 DTASVLFEAMEYIRFLHDQVKALSAPYLVGAPTVEIPEQE--HYNLRGQGLCLVPISCSL 547
           DTASVL EAMEYI+FLH+QVK LSAPYL   PTV + E E   ++LR +GLCLVPISC+ 
Sbjct: 79  DTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQEVEPCSHSLRSRGLCLVPISCTA 138

Query: 548 RVVGTNGADIWASMKGSSPR 607
            V  +NGADIWA +K  SP+
Sbjct: 139 GVARSNGADIWAPVKTISPK 158


>ref|XP_002325599.1| predicted protein [Populus trichocarpa] gi|222862474|gb|EEE99980.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score =  158 bits (399), Expect = 3e-36
 Identities = 78/132 (59%), Positives = 96/132 (72%)
 Frame = +2

Query: 212 ENKRGPASLDHCSVICDTMKRHKTEVLISRKERKEMMGDRIATLQQLVSPYGKTDTASVL 391
           ENKR P S+DH ++     KRHK +  IS KERKE +G+RI  LQQLVSPYGKTDTASVL
Sbjct: 2   ENKRSPCSVDHGTLTSLATKRHKADFSISTKERKEKLGERIVALQQLVSPYGKTDTASVL 61

Query: 392 FEAMEYIRFLHDQVKALSAPYLVGAPTVEIPEQEHYNLRGQGLCLVPISCSLRVVGTNGA 571
            EAMEYIRFLH+QV+ LSAPYL G  T ++     ++L  +GLCLVPIS +  +  +NGA
Sbjct: 62  MEAMEYIRFLHEQVQVLSAPYLQGTSTAQMQGLGQHSLESKGLCLVPISYTAGIARSNGA 121

Query: 572 DIWASMKGSSPR 607
           DIWA +K  SP+
Sbjct: 122 DIWAPIKSPSPK 133


>ref|XP_002273925.1| PREDICTED: transcription factor bHLH113 [Vitis vinifera]
           gi|147799457|emb|CAN65949.1| hypothetical protein
           VITISV_012226 [Vitis vinifera]
           gi|296084284|emb|CBI24672.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  154 bits (389), Expect = 5e-35
 Identities = 81/135 (60%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = +2

Query: 206 MTENKRGPASLDHCSVICDTMKRHKTEVLISRKERKEMMGDRIATLQQLVSPYGKTDTAS 385
           M E+KR P S+D   +     KR K ++ IS KERKE +G+RIA LQQLVSP+GKTDTAS
Sbjct: 1   MAEHKRSPISVDQGGLTSLAPKRQKPDLTISTKERKEKVGERIAALQQLVSPFGKTDTAS 60

Query: 386 VLFEAMEYIRFLHDQVKALSAPYLVGAPTVEIPEQEHYNLRGQGLCLVPISCSLRVVGTN 565
           VL EAMEYIRFL +QVK LSAPYL    T ++ E E Y+LR +GLCLVPIS ++ V  +N
Sbjct: 61  VLLEAMEYIRFLQEQVKVLSAPYLQSTTTAKMQELERYSLRSRGLCLVPISYTVGVARSN 120

Query: 566 GADIWASMK-GSSPR 607
           GADIWA +K  SSP+
Sbjct: 121 GADIWAPIKTDSSPK 135


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