BLASTX nr result
ID: Coptis21_contig00019927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00019927
(576 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269011.2| PREDICTED: soluble starch synthase 3, chloro... 199 4e-49
ref|XP_002305571.1| predicted protein [Populus trichocarpa] gi|2... 189 2e-46
ref|XP_002518476.1| starch synthase, putative [Ricinus communis]... 186 2e-45
ref|XP_003541618.1| PREDICTED: soluble starch synthase 3, chloro... 182 5e-44
emb|CAB40374.1| Starch synthase isoform SS III [Vigna unguiculata] 180 1e-43
>ref|XP_002269011.2| PREDICTED: soluble starch synthase 3,
chloroplastic/amyloplastic-like [Vitis vinifera]
Length = 1177
Score = 199 bits (505), Expect = 4e-49
Identities = 88/129 (68%), Positives = 111/129 (86%)
Frame = -2
Query: 518 LDPHIYKQVLEDLAEESYSRGINMFIYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAF 339
++ +++KQVLE+LAEE++SRG MF YPQVVK DQ+IEVFLNRS S L NE +V+IMGAF
Sbjct: 261 MEANLHKQVLEELAEENFSRGNKMFYYPQVVKPDQDIEVFLNRSVSTLSNEPDVMIMGAF 320
Query: 338 NDWKWKSFTTKLNKTELNGDWWSCRVYVPKEAYKMEFVFFNGGSVYENNGRKDFFVPVEG 159
NDW+WKSFT +LNKT L GDWWSC+V++PKEAYKM+FVFFNG +VY+NN +KDF +PV G
Sbjct: 321 NDWRWKSFTIQLNKTHLQGDWWSCQVHIPKEAYKMDFVFFNGTNVYDNNNQKDFCIPVHG 380
Query: 158 EMDDVSFED 132
MD ++FED
Sbjct: 381 GMDALAFED 389
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Frame = -2
Query: 443 IYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAFNDWK-WKSFTTKLNKTE-LNGDWWS 270
I P+ K D + ++ NRS L + +++ I G N+WK S L K E GDWW
Sbjct: 461 IEPREFKGDDLVRLYYNRSSGPLAHANDIWIHGGHNNWKDGLSIVGSLIKDEKKEGDWWY 520
Query: 269 CRVYVPKEAYKMEFVFFNG----GSVYENNGRKDF 177
V VP+ A +++VF +G S+Y+NN R+DF
Sbjct: 521 VEVVVPERALVLDWVFADGPPQRASLYDNNHREDF 555
>ref|XP_002305571.1| predicted protein [Populus trichocarpa] gi|222848535|gb|EEE86082.1|
predicted protein [Populus trichocarpa]
Length = 1017
Score = 189 bits (481), Expect = 2e-46
Identities = 87/144 (60%), Positives = 112/144 (77%)
Frame = -2
Query: 560 EAEEKESLVNKTPGLDPHIYKQVLEDLAEESYSRGINMFIYPQVVKSDQEIEVFLNRSFS 381
E EEK + + KQ +E LAEE++S+G +F+YPQ+VK D++IEVFLNRS S
Sbjct: 87 EMEEKLRKEETDRLAEEKLRKQEIERLAEENFSKGNKLFVYPQMVKPDEDIEVFLNRSLS 146
Query: 380 ALKNESNVLIMGAFNDWKWKSFTTKLNKTELNGDWWSCRVYVPKEAYKMEFVFFNGGSVY 201
L +E ++LIMGAFNDW+WKSFT +L+KT LNGDWWSC+V+VPKEAYKM+FVFFNG VY
Sbjct: 147 TLSDEPDILIMGAFNDWRWKSFTFRLSKTHLNGDWWSCQVHVPKEAYKMDFVFFNGQDVY 206
Query: 200 ENNGRKDFFVPVEGEMDDVSFEDF 129
+NN RKDF++ VEG MD +F+DF
Sbjct: 207 DNNDRKDFYILVEGGMDAFAFDDF 230
Score = 58.9 bits (141), Expect = 6e-07
Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Frame = -2
Query: 500 KQVLEDLAEESYSRGIN--MFIYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAFNDWK 327
++ L++L +++ +R N + P K + I+++ N+S L + +++ + G N+WK
Sbjct: 281 RRTLQELMKKA-ARSFNNVCHVEPSEFKGEDTIKLYYNKSSGPLAHANDLWVHGGHNNWK 339
Query: 326 -WKSFTTKL-NKTELNGDWWSCRVYVPKEAYKMEFVFFNG----GSVYENNGRKDF 177
S +L + + +GDWW V VP A+ +++VF +G +VY+NN R+DF
Sbjct: 340 DGLSIVERLVSSDKKDGDWWYANVVVPDRAFVLDWVFADGPPQNATVYDNNHRQDF 395
>ref|XP_002518476.1| starch synthase, putative [Ricinus communis]
gi|223542321|gb|EEF43863.1| starch synthase, putative
[Ricinus communis]
Length = 1058
Score = 186 bits (472), Expect = 2e-45
Identities = 85/124 (68%), Positives = 102/124 (82%)
Frame = -2
Query: 500 KQVLEDLAEESYSRGINMFIYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAFNDWKWK 321
KQ +E LAE S+SRG +FIYP VVK DQ+IEV+LNRS S L NE +V IMGAFNDW+WK
Sbjct: 156 KQEIEGLAEYSFSRGNKLFIYPLVVKPDQDIEVYLNRSLSTLNNEPDVFIMGAFNDWRWK 215
Query: 320 SFTTKLNKTELNGDWWSCRVYVPKEAYKMEFVFFNGGSVYENNGRKDFFVPVEGEMDDVS 141
SFT +LNKT L GDWWSC+V+VPKEAYKM+FVFFNG +VY+NN +KDF VEG MD ++
Sbjct: 216 SFTIRLNKTHLKGDWWSCQVHVPKEAYKMDFVFFNGKNVYDNNDKKDFCTAVEGGMDALT 275
Query: 140 FEDF 129
F+DF
Sbjct: 276 FDDF 279
>ref|XP_003541618.1| PREDICTED: soluble starch synthase 3,
chloroplastic/amyloplastic-like [Glycine max]
Length = 1149
Score = 182 bits (461), Expect = 5e-44
Identities = 79/130 (60%), Positives = 106/130 (81%)
Frame = -2
Query: 518 LDPHIYKQVLEDLAEESYSRGINMFIYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAF 339
L+ + +Q +E +AEE S+GI +F+YP VVK DQ+IE+FLN++ S L E ++LIMGAF
Sbjct: 231 LEANQRRQEIERIAEEKLSQGIKLFVYPPVVKPDQDIELFLNKNLSTLSEEPDILIMGAF 290
Query: 338 NDWKWKSFTTKLNKTELNGDWWSCRVYVPKEAYKMEFVFFNGGSVYENNGRKDFFVPVEG 159
NDWKWKSF+ +LNK L GDWWSC++YVPKEAYK++FVFFNG +VY+NN +KDF +PV+G
Sbjct: 291 NDWKWKSFSIRLNKLHLKGDWWSCQLYVPKEAYKVDFVFFNGQNVYDNNDQKDFCIPVDG 350
Query: 158 EMDDVSFEDF 129
MD ++FEDF
Sbjct: 351 GMDALAFEDF 360
Score = 62.4 bits (150), Expect = 5e-08
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = -2
Query: 443 IYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAFNDWKW-KSFTTKLNKTEL-NGDWWS 270
I P K I ++ NRS L N + + I G N+WK+ S +L K+ L G+WW
Sbjct: 431 IEPSEFKGKDLIRLYYNRSSGPLANANEIWIHGGHNNWKYGLSIVERLVKSVLKGGEWWY 490
Query: 269 CRVYVPKEAYKMEFVFFNG----GSVYENNGRKDFFVPVEGEMDDVSF 138
V VP +A +++VF +G VY+NN ++DF V G + D +
Sbjct: 491 ADVVVPDQALVLDWVFADGPPKKAVVYDNNRKQDFHAIVPGAIPDEQY 538
>emb|CAB40374.1| Starch synthase isoform SS III [Vigna unguiculata]
Length = 1147
Score = 180 bits (457), Expect = 1e-43
Identities = 78/130 (60%), Positives = 106/130 (81%)
Frame = -2
Query: 518 LDPHIYKQVLEDLAEESYSRGINMFIYPQVVKSDQEIEVFLNRSFSALKNESNVLIMGAF 339
L+ ++ KQ +E +AEE++ RG +F+YP VVK D++IEVFLN++ S L +E ++LI+GAF
Sbjct: 229 LEENLRKQEIERIAEENFLRGAKLFVYPPVVKPDEDIEVFLNKNLSTLSDEPDILILGAF 288
Query: 338 NDWKWKSFTTKLNKTELNGDWWSCRVYVPKEAYKMEFVFFNGGSVYENNGRKDFFVPVEG 159
NDW+WKSFT +LNKT L DWWSC++YVP+EAYK++FVFFNG SVY+NN +KDF +PV G
Sbjct: 289 NDWEWKSFTIRLNKTHLKDDWWSCQLYVPREAYKIDFVFFNGQSVYDNNDQKDFCIPVVG 348
Query: 158 EMDDVSFEDF 129
MD + FEDF
Sbjct: 349 GMDALVFEDF 358