BLASTX nr result

ID: Coptis21_contig00019921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019921
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC44500.1| beta-galactosidase [Fragaria x ananassa]              214   4e-54
ref|XP_002327432.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
gb|ABK96254.1| unknown [Populus trichocarpa x Populus deltoides]      213   1e-53
gb|ACP18875.1| beta-galactosidase pBG(a) [Carica papaya]              212   3e-53
ref|XP_002329051.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-52

>emb|CAC44500.1| beta-galactosidase [Fragaria x ananassa]
          Length = 843

 Score =  214 bits (546), Expect = 4e-54
 Identities = 95/128 (74%), Positives = 107/128 (83%)
 Frame = -2

Query: 385  WINEQSIGRYWSAYKASATCGSCSYTGTYDEKKCLSNCGDGSQRWYHVPHSWLNPSGNLL 206
            WIN++SIGRYW AYKAS TCG C+Y GT+ EKKCLSNCG+ SQRWYHVP SWLNP+GNLL
Sbjct: 651  WINDRSIGRYWPAYKASGTCGECNYAGTFSEKKCLSNCGEASQRWYHVPRSWLNPTGNLL 710

Query: 205  VIFEEWRGDPNGISLVSRTVDIVCADIFELQPTLLSYQS*VSGTINRPLRPKAHLRCYPG 26
            V+ EEW GDPNGI LV R VD VCADI+E QP L+S+Q  VSG +N+PLRPKAHL C PG
Sbjct: 711  VVLEEWGGDPNGIFLVRREVDSVCADIYEWQPNLMSWQMQVSGRVNKPLRPKAHLSCGPG 770

Query: 25   QKILSIKF 2
            QKI SIKF
Sbjct: 771  QKISSIKF 778


>ref|XP_002327432.1| predicted protein [Populus trichocarpa] gi|222835986|gb|EEE74407.1|
            predicted protein [Populus trichocarpa]
          Length = 839

 Score =  213 bits (542), Expect = 1e-53
 Identities = 94/128 (73%), Positives = 106/128 (82%)
 Frame = -2

Query: 385  WINEQSIGRYWSAYKASATCGSCSYTGTYDEKKCLSNCGDGSQRWYHVPHSWLNPSGNLL 206
            WIN Q +GR+W AYKAS TCG CSY GTY+EKKC +NCG+ SQRWYHVP SWL P+GNLL
Sbjct: 647  WINGQHVGRHWPAYKASGTCGDCSYIGTYNEKKCSTNCGEASQRWYHVPQSWLKPTGNLL 706

Query: 205  VIFEEWRGDPNGISLVSRTVDIVCADIFELQPTLLSYQS*VSGTINRPLRPKAHLRCYPG 26
            V+FEEW GDPNGISLV R VD VCADI+E QPTL++YQ   SG +N+PLRPKAHL C PG
Sbjct: 707  VVFEEWGGDPNGISLVRRDVDSVCADIYEWQPTLMNYQMQASGKVNKPLRPKAHLSCGPG 766

Query: 25   QKILSIKF 2
            QKI SIKF
Sbjct: 767  QKIRSIKF 774


>gb|ABK96254.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 846

 Score =  213 bits (542), Expect = 1e-53
 Identities = 94/128 (73%), Positives = 106/128 (82%)
 Frame = -2

Query: 385  WINEQSIGRYWSAYKASATCGSCSYTGTYDEKKCLSNCGDGSQRWYHVPHSWLNPSGNLL 206
            WIN Q +GR+W AYKAS TCG CSY GTY+EKKC +NCG+ SQRWYHVP SWL P+GNLL
Sbjct: 654  WINGQHVGRHWPAYKASGTCGDCSYIGTYNEKKCSTNCGEASQRWYHVPQSWLKPTGNLL 713

Query: 205  VIFEEWRGDPNGISLVSRTVDIVCADIFELQPTLLSYQS*VSGTINRPLRPKAHLRCYPG 26
            V+FEEW GDPNGISLV R VD VCADI+E QPTL++YQ   SG +N+PLRPKAHL C PG
Sbjct: 714  VVFEEWGGDPNGISLVRRDVDSVCADIYEWQPTLMNYQMQASGKVNKPLRPKAHLSCGPG 773

Query: 25   QKILSIKF 2
            QKI SIKF
Sbjct: 774  QKIRSIKF 781


>gb|ACP18875.1| beta-galactosidase pBG(a) [Carica papaya]
          Length = 836

 Score =  212 bits (539), Expect = 3e-53
 Identities = 93/128 (72%), Positives = 108/128 (84%)
 Frame = -2

Query: 385  WINEQSIGRYWSAYKASATCGSCSYTGTYDEKKCLSNCGDGSQRWYHVPHSWLNPSGNLL 206
            WIN +SIGR+W AYKAS +CG C Y GT++EKKCLSNCG+ SQRWYHVP SW NP+GNLL
Sbjct: 643  WINGKSIGRHWPAYKASGSCGWCDYAGTFNEKKCLSNCGEASQRWYHVPRSWPNPTGNLL 702

Query: 205  VIFEEWRGDPNGISLVSRTVDIVCADIFELQPTLLSYQS*VSGTINRPLRPKAHLRCYPG 26
            V+FEEW GDPNGISLV R VD VCADI+E QPTL++YQ   SG +N+PLRPKAHL+C PG
Sbjct: 703  VVFEEWGGDPNGISLVRREVDSVCADIYEWQPTLMNYQMQASGKVNKPLRPKAHLQCGPG 762

Query: 25   QKILSIKF 2
            QKI S+KF
Sbjct: 763  QKISSVKF 770


>ref|XP_002329051.1| predicted protein [Populus trichocarpa] gi|222839722|gb|EEE78045.1|
            predicted protein [Populus trichocarpa]
          Length = 830

 Score =  209 bits (533), Expect = 1e-52
 Identities = 91/128 (71%), Positives = 105/128 (82%)
 Frame = -2

Query: 385  WINEQSIGRYWSAYKASATCGSCSYTGTYDEKKCLSNCGDGSQRWYHVPHSWLNPSGNLL 206
            WIN Q +GR+W AYKAS TCG C+Y GTY+E KC +NCG+ SQRWYHVP SWL P+GNLL
Sbjct: 638  WINGQHVGRHWPAYKASGTCGECTYIGTYNENKCSTNCGEASQRWYHVPQSWLKPTGNLL 697

Query: 205  VIFEEWRGDPNGISLVSRTVDIVCADIFELQPTLLSYQS*VSGTINRPLRPKAHLRCYPG 26
            V+FEEW GDPNG+SLV R VD VCADI+E QPTL++YQ   SG +N+PLRPKAHL C PG
Sbjct: 698  VVFEEWGGDPNGVSLVRREVDSVCADIYEWQPTLMNYQMQASGKVNKPLRPKAHLSCGPG 757

Query: 25   QKILSIKF 2
            QKI SIKF
Sbjct: 758  QKIRSIKF 765