BLASTX nr result

ID: Coptis21_contig00019882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019882
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94391.1| unknown [Populus trichocarpa]                          108   6e-22
ref|XP_002281176.1| PREDICTED: uncharacterized protein LOC100249...   103   1e-20
ref|XP_003523745.1| PREDICTED: uncharacterized protein LOC100820...    99   5e-19
ref|XP_003526495.1| PREDICTED: uncharacterized protein LOC100796...    98   8e-19
ref|NP_001078571.1| uncharacterized protein [Arabidopsis thalian...    94   9e-18

>gb|ABK94391.1| unknown [Populus trichocarpa]
          Length = 91

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/92 (66%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = +3

Query: 21  MASRYRSISKPAFNFLKSSLNKPKLTKPISPPPQPTRSSLPTFSRLPSELGCVQSLLPLH 200
           MASRYRS+SKP F+ LKS+ NKP L    +P   P R SL TFSR   +LG +QSLLP H
Sbjct: 1   MASRYRSLSKPTFSLLKSTTNKPTLQPKSTPSLLPARPSL-TFSRPVPQLGAIQSLLPFH 59

Query: 201 SAISSARLTSCLGIS--NSRSLSQELGLSVPR 290
           SA+SSARLTSCL I   +SRSLSQELGLSVPR
Sbjct: 60  SAVSSARLTSCLSIDSRSSRSLSQELGLSVPR 91


>ref|XP_002281176.1| PREDICTED: uncharacterized protein LOC100249040 [Vitis vinifera]
           gi|296081836|emb|CBI20841.3| unnamed protein product
           [Vitis vinifera]
          Length = 90

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/92 (63%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
 Frame = +3

Query: 21  MASRYRSISKPAFNFLKSSLNKPKLTKPISPPPQPTRSSLPTFSRLPSELGCVQSLLPLH 200
           MASRYRS+SKP  + LKS++ K KL+ P   P   T  + PT  R  S++ C+QSLLPLH
Sbjct: 1   MASRYRSLSKPTLSLLKSTITKTKLSNPT--PLLCTPGASPTLPRSFSQIRCLQSLLPLH 58

Query: 201 SAISSARLTSCLGI--SNSRSLSQELGLSVPR 290
           +A+SSARLTSCLGI  S+SRSLSQELGLSVPR
Sbjct: 59  TAVSSARLTSCLGIDSSSSRSLSQELGLSVPR 90


>ref|XP_003523745.1| PREDICTED: uncharacterized protein LOC100820535 [Glycine max]
          Length = 91

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
 Frame = +3

Query: 21  MASRYRSISKPAFNFLKSSLNKPKLTKPISPPPQPTRSSLPTFSR-LPSELGCVQSLLPL 197
           MASRYRS+S+PAF+ +KS++ KP  +  + P     ++  P  +R +  ELGC+QSLLPL
Sbjct: 1   MASRYRSVSQPAFSIIKSTITKP--SSKLLPSSFLLKTRSPVTARWVGGELGCLQSLLPL 58

Query: 198 HSAISSARLTSCLGI--SNSRSLSQELGLSVPR 290
           HSA+SSARLTSCLGI  S SRSLSQE+GLS PR
Sbjct: 59  HSAVSSARLTSCLGIDSSRSRSLSQEMGLSTPR 91


>ref|XP_003526495.1| PREDICTED: uncharacterized protein LOC100796764 [Glycine max]
          Length = 93

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 58/94 (61%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
 Frame = +3

Query: 21  MASRYRSISKPAFNFLKSSLNKPKLTKPI-SPPPQPTRSSLPTFS-RLPSELGCVQSLLP 194
           MASRYRS+S+PAF+ +KS++ KP  +KP+ S     TRS +     R   +LGC+QSLLP
Sbjct: 1   MASRYRSVSQPAFSLIKSTITKPA-SKPVPSSFLLKTRSPVTARQVRFGGKLGCLQSLLP 59

Query: 195 LHSAISSARLTSCLGI--SNSRSLSQELGLSVPR 290
           LHSA+SSARLTSCLGI  S SRSLSQE+GLS PR
Sbjct: 60  LHSAVSSARLTSCLGIDSSRSRSLSQEMGLSTPR 93


>ref|NP_001078571.1| uncharacterized protein [Arabidopsis thaliana]
           gi|38566540|gb|AAR24160.1| At5g11630 [Arabidopsis
           thaliana] gi|40823768|gb|AAR92303.1| At5g11630
           [Arabidopsis thaliana] gi|332004321|gb|AED91704.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 91

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = +3

Query: 21  MASRYRSISKPAFNFLKSSLNKPKLTKP-----ISPPPQPTRSSLPTFSRLPSELGCVQS 185
           MASR RS+SKPAF+  +S++NKP +        I  PP P       FSR   +LG +QS
Sbjct: 1   MASRCRSLSKPAFSAFRSAMNKPSIRPKSASSFIGVPPSPG------FSRPIGQLGSLQS 54

Query: 186 LLPLHSAISSARLTSCLGI--SNSRSLSQELGLSVPR 290
           LLPL+SA++SARLTSCLGI   NSRSL+QELGLSVPR
Sbjct: 55  LLPLYSAVASARLTSCLGIDSQNSRSLAQELGLSVPR 91


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