BLASTX nr result

ID: Coptis21_contig00019871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019871
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275565.1| PREDICTED: probable serine/threonine-protein...    69   5e-10
ref|XP_002533407.1| kinase, putative [Ricinus communis] gi|22352...    57   2e-06

>ref|XP_002275565.1| PREDICTED: probable serine/threonine-protein kinase WNK6-like
           [Vitis vinifera]
          Length = 677

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
 Frame = -2

Query: 608 DGSYRKCSINTCMSADLGFVKY-EYGMKTEVREALYGVELGACYNDKDIGINVGSNDMTX 432
           +GS +K S N  +SA+ G + Y EYG K  VR++L  V+  +C  DK    ++GSN    
Sbjct: 557 EGSDKKYSHNAYLSAESGCMDYNEYGSKRGVRQSLSAVQTSSCNLDKGKATDIGSNGAVT 616

Query: 431 XXXXXXXXXXIFVGHSEDGELRAELEHIEFQYQQAMKELSVKRHEAIVSAMKRLSLRKLE 252
                          SE+  L  ELE IE QY +A+KE++ +R EAI    KRLS +++E
Sbjct: 617 SSDYPIDSSLSDQVESENMIL--ELEMIELQYHEAVKEIAKRRQEAIRETKKRLSQKRIE 674

Query: 251 S 249
           S
Sbjct: 675 S 675


>ref|XP_002533407.1| kinase, putative [Ricinus communis] gi|223526752|gb|EEF28980.1|
           kinase, putative [Ricinus communis]
          Length = 662

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -2

Query: 596 RKCSINTCMSADLGFVKYE-YGMKTEVREALYGVELGACYNDKDIGINVGSNDMTXXXXX 420
           ++ S N+C++A+ G V ++ +G K    + L  +E G      D  + + S+  T     
Sbjct: 563 KRLSFNSCVTAESGLVNFDGHGFKGSQGDLLASMEAG---QPPDSHMEISSDYPTSISFL 619

Query: 419 XXXXXXIFVGHSEDGELRAELEHIEFQYQQAMKELSVKRHEAIVSAMKRLS 267
                      +E  ELR ELE IE QYQ+A+KE+  +RH+AI+   KRLS
Sbjct: 620 S--------NKNESNELREELEKIELQYQEAIKEIIRQRHKAIIETTKRLS 662


Top