BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019865
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526491.1| pentatricopeptide repeat-containing protein,...    68   7e-10
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    62   6e-08
ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534166|gb|EEF35882.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 884

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/104 (38%), Positives = 61/104 (58%)
 Frame = -3

Query: 318 TVNSYERRLILVNLSKLIKQGQXXXXXXXXSHFCPSTLSTLIQHFGPNRKLSFAFFKFSF 139
           ++NS ERR+++V LSKLIKQG+          FCP  L  +++    +R+ +FAFFK +F
Sbjct: 89  SLNSNERRILVVELSKLIKQGKGYILKSFSQKFCPFFLVKIMKLL-ESRQSAFAFFKLAF 147

Query: 138 QENXXXXXXXXXXXLIHILASHDLRFLSQDVLTHVVGNVGPARS 7
           Q N             HILA+  L+ L+QDV++ V+  +G +RS
Sbjct: 148 Q-NDSDATVHSCCIAAHILAAESLQLLAQDVISWVIRRIGASRS 190


>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/104 (36%), Positives = 61/104 (58%)
 Frame = -3

Query: 318 TVNSYERRLILVNLSKLIKQGQXXXXXXXXSHFCPSTLSTLIQHFGPNRKLSFAFFKFSF 139
           ++N  ERR I+V LSK+IKQ Q         +FCP  L  +++    +R+++FAFFKF+F
Sbjct: 77  SINPNERRKIVVRLSKMIKQSQGYVLRGFAQNFCPCFLVKIMKLL-ESREIAFAFFKFAF 135

Query: 138 QENXXXXXXXXXXXLIHILASHDLRFLSQDVLTHVVGNVGPARS 7
           Q++             H+LA+ +LR ++QDV+  V+  +G  RS
Sbjct: 136 QDD-SESTIRSCCVAAHLLAAEELRHVAQDVIWWVIARIGVLRS 178


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/105 (34%), Positives = 59/105 (56%)
 Frame = -3

Query: 318 TVNSYERRLILVNLSKLIKQGQXXXXXXXXSHFCPSTLSTLIQHFGPNRKLSFAFFKFSF 139
           +V + +RR + V LSK IK  Q         +FCP  L  +++ F   R+ ++AFFK +F
Sbjct: 68  SVTTNDRRRVTVGLSKAIKLYQGYVLKDVSRNFCPFLLVKIMKLF-ECRETAYAFFKLAF 126

Query: 138 QENXXXXXXXXXXXLIHILASHDLRFLSQDVLTHVVGNVGPARSQ 4
           +++             H+LA+  LRFL+QD+++ VV  +GP RS+
Sbjct: 127 KDDSEETVRSCCVLA-HLLAAEQLRFLAQDIVSWVVARIGPGRSK 170


>ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/105 (34%), Positives = 59/105 (56%)
 Frame = -3

Query: 318 TVNSYERRLILVNLSKLIKQGQXXXXXXXXSHFCPSTLSTLIQHFGPNRKLSFAFFKFSF 139
           +V + +RR + V LSK IK  Q         +FCP  L  +++ F   R+ ++AFFK +F
Sbjct: 99  SVTTNDRRRVTVGLSKAIKLYQGYVLKGLSRNFCPFLLVKIMKLF-ECRETAYAFFKLAF 157

Query: 138 QENXXXXXXXXXXXLIHILASHDLRFLSQDVLTHVVGNVGPARSQ 4
           +++             H+LA+  LRFL+QD+++ VV  +GP RS+
Sbjct: 158 KDDSEETVRSCCVLA-HLLAAEQLRFLAQDIVSWVVARIGPGRSK 201